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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002403.1-P
Bra006619.1-P
Bra018039.1-P plasma membrane
Bra019560.1-P plasma membrane
Bra020182.1-P
Bra029914.1-P plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 Bra018039.1-P AT3G48740.1 24027245
AT3G48740.1 Bra019560.1-P AT3G48740.1 24027245
AT3G48740.1 Bra029914.1-P AT3G48740.1 24027245
AT3G48740.1 Bra002403.1-P AT5G22290.1 21798944
AT3G48740.1 Bra006619.1-P AT5G22290.1 21798944
AT3G48740.1 Bra020182.1-P AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77928 Canola plasma membrane 99.3 99.3
Bra018039.1-P Field mustard plasma membrane 96.49 95.16
Bra029914.1-P Field mustard plasma membrane 92.63 91.03
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 91.58 90.31
Bra009700.1-P Field mustard plasma membrane 84.56 83.68
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 80.35 82.67
TraesCS6B01G421600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 42.11 62.83
Bra010477.1-P Field mustard golgi, plasma membrane 54.39 56.99
Bra013854.1-P Field mustard golgi, plasma membrane 54.04 56.41
Bra040489.1-P Field mustard golgi, plasma membrane 56.49 54.76
PGSC0003DMT400082699 Potato extracellular, plasma membrane 24.91 54.62
Bra019197.1-P Field mustard plasma membrane 44.21 52.94
TraesCS6D01G009700.1 Wheat plasma membrane 51.93 51.57
TraesCS6B01G015300.1 Wheat golgi, plasma membrane, vacuole 51.58 51.22
Solyc03g097620.1.1 Tomato plasma membrane 49.47 51.09
TraesCS6A01G009000.1 Wheat plasma membrane 51.23 50.87
HORVU1Hr1G010210.2 Barley plasma membrane 51.58 50.34
TraesCS6A01G009100.1 Wheat plasma membrane 51.23 50.17
Bra012412.1-P Field mustard plasma membrane 30.53 49.71
TraesCS1B01G066900.1 Wheat plasma membrane 50.53 49.66
TraesCS1D01G052700.1 Wheat plasma membrane 51.23 49.32
TraesCS6B01G015200.1 Wheat plasma membrane 50.88 49.32
TraesCS6D01G012100.1 Wheat plasma membrane 50.88 49.32
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 47.37 49.09
TraesCS1A01G050400.1 Wheat plasma membrane 50.18 48.81
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 48.07 48.75
TraesCS6B01G015100.1 Wheat plasma membrane 50.18 48.64
TraesCS6D01G009600.1 Wheat plasma membrane 49.82 48.46
KXG28442 Sorghum golgi, plasma membrane 49.12 48.44
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 49.82 48.3
TraesCS6B01G421800.1 Wheat plasma membrane 49.12 48.28
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 48.77 48.1
TraesCS6D01G367300.1 Wheat golgi, plasma membrane, vacuole 48.07 48.07
TraesCS6D01G367200.1 Wheat plasma membrane 48.42 47.92
Os11t0508600-01 Rice golgi, plasma membrane 50.88 47.85
TraesCSU01G206000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.18 47.83
TraesCS6A01G382600.1 Wheat plasma membrane 48.42 47.59
TraesCS6D01G009500.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.82 47.49
Zm00001d041067_P001 Maize plasma membrane 49.12 47.46
Os12t0476200-01 Rice extracellular, golgi 49.12 47.3
TraesCS6B01G421500.1 Wheat plasma membrane 48.77 47.28
TraesCS6D01G367400.1 Wheat plasma membrane 48.07 47.24
Zm00001d023673_P001 Maize plasma membrane 49.82 47.18
TraesCS6A01G382400.1 Wheat plasma membrane 48.77 47.12
Zm00001d049252_P001 Maize plasma membrane 48.42 47.1
EES15957 Sorghum golgi, plasma membrane 49.82 47.02
TraesCS6B01G421700.1 Wheat plasma membrane 47.02 47.02
GSMUA_Achr8P09230_001 Banana golgi, plasma membrane 46.32 46.98
EES17001 Sorghum golgi, plasma membrane 49.82 46.71
Zm00001d023677_P001 Maize plasma membrane 49.47 46.69
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 46.67 46.18
GSMUA_AchrUn_... Banana golgi, plasma membrane 44.21 44.68
OQU79094 Sorghum plasma membrane 49.12 44.59
KRH41096 Soybean golgi, plasma membrane 45.26 43.88
KRH54137 Soybean plasma membrane 47.37 43.69
Bra022761.1-P Field mustard golgi, plasma membrane 43.86 43.25
Bra023394.1-P Field mustard plasma membrane 44.91 43.1
TraesCS7B01G050500.1 Wheat plasma membrane 46.32 42.86
Os02t0513100-01 Rice golgi, plasma membrane, plastid 47.72 42.63
HORVU7Hr1G030160.1 Barley plasma membrane 46.67 42.49
TraesCS7A01G147300.1 Wheat plasma membrane 45.96 42.26
TraesCS7D01G149000.1 Wheat plasma membrane 45.96 42.26
Bra000116.1-P Field mustard golgi, plasma membrane 39.3 41.48
Zm00001d050577_P001 Maize plasma membrane 44.21 41.45
OQU89754 Sorghum plastid 39.65 41.39
GSMUA_Achr10P... Banana plasma membrane 47.72 40.72
Zm00001d021064_P001 Maize plasma membrane 40.7 40.14
TraesCS5A01G289200.1 Wheat plasma membrane 40.35 40.07
TraesCS5B01G288600.1 Wheat plasma membrane 40.35 40.07
TraesCS5D01G297100.1 Wheat plasma membrane 40.35 40.07
EES06868 Sorghum golgi, plasma membrane, plastid 47.02 39.88
Zm00001d007365_P001 Maize endoplasmic reticulum 48.07 39.83
Os09t0508250-00 Rice extracellular, golgi 24.21 39.43
KRH59783 Soybean golgi, plasma membrane 32.63 39.41
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 48.42 39.2
Bra017916.1-P Field mustard extracellular, golgi 32.98 38.21
GSMUA_Achr8P00620_001 Banana plasma membrane, vacuole 46.67 37.89
Zm00001d016590_P001 Maize plasma membrane 42.46 37.35
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 41.75 37.07
Os08t0535200-01 Rice golgi, plasma membrane, plastid 39.65 36.81
TraesCS6A01G382500.1 Wheat plasma membrane 39.3 36.48
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 40.35 36.39
Bra025595.1-P Field mustard plasma membrane 30.18 36.13
EES14183 Sorghum plastid 38.95 35.92
Bra016421.1-P Field mustard golgi, plasma membrane 31.58 35.86
Zm00001d031647_P001 Maize plasma membrane 38.6 35.48
TraesCS7A01G261100.1 Wheat plasma membrane 37.19 34.98
TraesCS7D01G263100.1 Wheat plasma membrane 37.54 34.97
TraesCS7B01G160000.1 Wheat plasma membrane 37.19 34.64
Bra001638.1-P Field mustard plasma membrane 28.07 34.63
Bra012752.1-P Field mustard extracellular, golgi, vacuole 29.12 34.58
HORVU7Hr1G054710.1 Barley plasma membrane 36.49 34.32
GSMUA_Achr11P... Banana plasma membrane, vacuole 40.0 34.23
GSMUA_AchrUn_... Banana plasma membrane 30.18 33.99
Bra008850.1-P Field mustard plasma membrane 24.91 33.97
Bra025317.1-P Field mustard plasma membrane 29.12 33.47
Bra021190.1-P Field mustard plasma membrane 27.02 33.33
Bra035270.1-P Field mustard plasma membrane 28.77 32.93
Bra033034.1-P Field mustard plasma membrane 28.07 32.65
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 27.37 32.5
Bra021577.1-P Field mustard plasma membrane 26.32 31.78
Bra027314.1-P Field mustard plasma membrane 23.86 31.63
Bra000725.1-P Field mustard plasma membrane 19.65 31.46
Bra022636.1-P Field mustard golgi, plasma membrane 27.37 30.12
Bra029244.1-P Field mustard plasma membrane 24.21 28.75
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 24.21 28.75
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 24.21 28.28
Bra003075.1-P Field mustard golgi, plasma membrane, plastid 18.25 27.08
Bra008206.1-P Field mustard nucleus 1.05 5.45
Protein Annotations
EnsemblPlants:Bra019560.1EnsemblPlants:Bra019560.1-PEnsemblPlantsGene:Bra019560Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF65PFAM:PF03083TMHMM:TMhelixUniParc:UPI000253EFF2
UniProt:M4DSR7MapMan:24.2.6.1::::
Description
AT3G48740 (E=2e-149) | nodulin MtN3 family protein
Coordinates
chrA06:+:12213339..12215738
Molecular Weight (calculated)
31586.3 Da
IEP (calculated)
9.555
GRAVY (calculated)
0.501
Length
285 amino acids
Sequence
(BLAST)
001: MPLFDTHNTW AFVFGLMGNV ISFAVFLSPV PTFYRVWKKK TTEGFQSLPY VVALFSATLW LYYATQKKDV FLLVTINSFG CFIETIYISI FLAYAPKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVV WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTP PHLGEKEVEA AKLPEVSLDI LKLGTVSSPE VRQANKCTCG NDRRPEVEDG QNAKNGKQSS SASPT
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.