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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 4
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06868 plasma membrane
EES14183 plasma membrane
EES15957 plasma membrane
EES17001 plasma membrane
KXG28442 plasma membrane
OQU79094 plasma membrane
OQU89754 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 EES06868 AT3G48740.1 24027245
AT3G48740.1 EES14183 AT3G48740.1 24027245
AT3G48740.1 EES15957 AT3G48740.1 24027245
AT3G48740.1 EES17001 AT3G48740.1 24027245
AT3G48740.1 KXG28442 AT3G48740.1 24027245
AT3G48740.1 OQU79094 AT3G48740.1 24027245
AT3G48740.1 OQU89754 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15957 Sorghum golgi, plasma membrane 89.17 92.72
EES17001 Sorghum golgi, plasma membrane 87.26 90.13
Zm00001d023677_P001 Maize plasma membrane 85.67 89.07
Zm00001d023673_P001 Maize plasma membrane 84.39 88.04
Zm00001d041067_P001 Maize plasma membrane 78.98 84.07
TraesCS6B01G421600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 50.0 82.2
Os12t0476200-01 Rice extracellular, golgi 71.02 75.34
TraesCS6D01G367300.1 Wheat golgi, plasma membrane, vacuole 63.38 69.82
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 63.38 68.86
TraesCS6A01G382600.1 Wheat plasma membrane 63.38 68.62
TraesCS6D01G367400.1 Wheat plasma membrane 63.38 68.62
TraesCS6D01G367200.1 Wheat plasma membrane 62.74 68.4
TraesCS6B01G421800.1 Wheat plasma membrane 62.74 67.93
TraesCS6A01G382400.1 Wheat plasma membrane 63.69 67.8
TraesCS6B01G421500.1 Wheat plasma membrane 63.38 67.69
TraesCS6B01G421700.1 Wheat plasma membrane 60.51 66.67
KRH63814 Soybean extracellular 20.38 65.98
KXG28442 Sorghum golgi, plasma membrane 60.51 65.74
CDY69440 Canola plasma membrane 40.76 59.81
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 52.87 59.07
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 50.64 57.82
TraesCS6A01G382500.1 Wheat plasma membrane 56.05 57.33
VIT_17s0000g00830.t01 Wine grape plasma membrane 48.73 56.67
KRH63811 Soybean plasma membrane 45.86 55.81
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 50.96 55.56
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 61.78 55.11
KRH54140 Soybean plasma membrane 45.22 54.62
KRH41097 Soybean golgi, plasma membrane 43.63 53.94
KRH54141 Soybean plasma membrane 44.27 53.88
KRH59785 Soybean endoplasmic reticulum, plasma membrane 43.31 52.92
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 45.86 52.75
CDY11047 Canola golgi, plasma membrane 45.86 52.75
CDY34333 Canola golgi, plasma membrane 45.86 52.75
CDY24854 Canola golgi, plasma membrane 45.22 52.4
Bra013854.1-P Field mustard golgi, plasma membrane 45.54 52.38
CDX92666 Canola golgi, plasma membrane 45.54 52.38
AT4G25010.1 Thale cress plasma membrane 46.82 52.31
Bra010477.1-P Field mustard golgi, plasma membrane 45.22 52.21
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 45.86 51.99
Solyc06g072620.2.1 Tomato golgi, plasma membrane 47.45 51.92
CDX87161 Canola endoplasmic reticulum 45.54 51.62
PGSC0003DMT400082699 Potato extracellular, plasma membrane 21.34 51.54
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 46.18 51.42
Solyc03g097620.1.1 Tomato plasma membrane 44.9 51.09
AT5G50800.1 Thale cress plasma membrane 47.77 51.02
PGSC0003DMT400011081 Potato plasma membrane 41.08 50.99
CDY16863 Canola endoplasmic reticulum, plasma membrane 44.9 50.9
Bra019197.1-P Field mustard plasma membrane 37.9 50.0
Solyc03g097580.2.1 Tomato golgi, plasma membrane 47.77 49.67
PGSC0003DMT400081210 Potato golgi, plasma membrane 46.82 49.66
Solyc03g097610.2.1 Tomato golgi, plasma membrane 44.59 49.65
CDX84877 Canola golgi, plasma membrane 42.99 49.63
AT5G23660.1 Thale cress plasma membrane 44.9 49.47
Bra040489.1-P Field mustard golgi, plasma membrane 46.18 49.32
CDY05819 Canola golgi, plasma membrane 46.18 49.32
KRH42232 Soybean endoplasmic reticulum, plasma membrane 42.99 49.27
KRH46856 Soybean plasma membrane 42.68 49.26
KRH01827 Soybean golgi, plasma membrane 42.04 49.25
CDX71659 Canola golgi, plasma membrane 46.18 49.15
Bra019560.1-P Field mustard plasma membrane 44.59 49.12
CDX77928 Canola plasma membrane 44.59 49.12
KRH46857 Soybean golgi, plasma membrane 42.68 49.08
KRH01828 Soybean plasma membrane 42.36 49.08
PGSC0003DMT400081212 Potato golgi, plasma membrane 44.59 48.95
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 44.9 48.79
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 30.89 48.74
Bra009700.1-P Field mustard plasma membrane 44.59 48.61
CDX88041 Canola plasma membrane 44.59 48.61
Solyc03g097590.2.1 Tomato golgi, plasma membrane 45.86 48.32
CDX80379 Canola plasma membrane 44.27 48.26
GSMUA_Achr10P... Banana plasma membrane 51.27 48.2
Bra022761.1-P Field mustard golgi, plasma membrane 44.27 48.1
Solyc03g097870.2.1 Tomato golgi, plasma membrane 45.86 48.0
Solyc03g097600.2.1 Tomato golgi, plasma membrane 45.22 47.97
CDX68492 Canola plasma membrane 43.63 47.9
CDX83046 Canola plasma membrane 43.63 47.9
Bra018039.1-P Field mustard plasma membrane 43.95 47.75
CDY05867 Canola plasma membrane 43.95 47.75
CDY08093 Canola plasma membrane 43.95 47.75
PGSC0003DMT400081211 Potato golgi, plasma membrane 44.9 47.64
OQU89754 Sorghum plastid 41.4 47.62
PGSC0003DMT400083992 Potato golgi, plasma membrane 45.22 47.33
Bra029914.1-P Field mustard plasma membrane 43.63 47.24
Solyc06g072630.2.1 Tomato plasma membrane 42.99 46.71
KRH58347 Soybean golgi, plasma membrane 42.04 46.64
CDY08964 Canola plastid 42.36 46.18
AT5G50790.1 Thale cress plasma membrane 42.36 46.02
VIT_17s0000g00820.t01 Wine grape plasma membrane 38.85 45.86
Solyc03g097560.2.1 Tomato golgi, plasma membrane 42.99 45.76
PGSC0003DMT400081206 Potato golgi, plasma membrane 42.68 45.73
CDX97233 Canola golgi, plasma membrane 42.99 45.3
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 33.76 45.11
CDX69663 Canola golgi, plasma membrane 42.68 44.97
Bra012412.1-P Field mustard plasma membrane 24.84 44.57
AT5G13170.1 Thale cress plasma membrane 41.4 44.52
EES06868 Sorghum golgi, plasma membrane, plastid 47.45 44.35
CDY25828 Canola mitochondrion, plasma membrane 24.52 44.0
KRH54137 Soybean plasma membrane 42.99 43.69
CDY53626 Canola plasma membrane 40.45 43.64
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 42.04 43.42
KRH10466 Soybean golgi, plasma membrane 34.39 43.37
KRH41096 Soybean golgi, plasma membrane 40.45 43.2
Bra023394.1-P Field mustard plasma membrane 40.76 43.1
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 40.76 43.1
CDX91144 Canola plasma membrane 40.76 43.1
Solyc05g024260.2.1 Tomato plasma membrane 40.45 43.05
CDX78511 Canola plasma membrane 39.49 42.47
Solyc06g072640.1.1 Tomato plasma membrane 37.9 42.2
EER92278 Sorghum golgi, plasma membrane 41.4 41.53
EES14183 Sorghum plastid 39.49 40.13
KRH59783 Soybean golgi, plasma membrane 29.94 39.83
KRH43976 Soybean golgi, plasma membrane, plastid 34.71 38.93
EES01039 Sorghum plasma membrane 29.3 37.7
Bra008850.1-P Field mustard plasma membrane 24.2 36.36
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 36.31 36.08
EES19554 Sorghum golgi, plasma membrane 28.34 34.77
OQU86800 Sorghum golgi, plasma membrane, vacuole 26.43 34.3
KXG33819 Sorghum extracellular, golgi 29.3 34.2
PGSC0003DMT400021966 Potato mitochondrion 21.34 33.5
EES01331 Sorghum endoplasmic reticulum, plasma membrane, plastid 23.89 32.47
EES20039 Sorghum golgi, plasma membrane, vacuole 24.2 31.8
EES06723 Sorghum golgi, plasma membrane, plastid 25.16 31.6
EES06744 Sorghum golgi, plasma membrane, plastid 24.84 31.2
KXG21564 Sorghum plasma membrane 24.2 30.89
EES00047 Sorghum plasma membrane 24.84 30.12
KXG32677 Sorghum golgi, plasma membrane, vacuole 23.25 30.04
EER94881 Sorghum golgi, plasma membrane 28.34 27.05
OQU84855 Sorghum plasma membrane 21.66 25.95
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1UniProt:A0A1Z5R5P9GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021EnsemblPlants:OQU79094
ProteinID:OQU79094ProteinID:OQU79094.1PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF56EnsemblPlantsGene:SORBI_3008G094300
InterPro:SWEET_sugar_transprTMHMM:TMhelixUniParc:UPI000B426925SEG:seg::
Description
hypothetical protein
Coordinates
chr8:-:44416458..44418843
Molecular Weight (calculated)
34588.7 Da
IEP (calculated)
10.154
GRAVY (calculated)
0.759
Length
314 amino acids
Sequence
(BLAST)
001: MAGLSLQHPW AFAFGLLGNL ISFLTFLAPI PTFYRIYKTK STEGFQSVPY VVALFSAMLW IFYALIKSNE TFLITINAAG CVIETIYIVM YFVYAPKKAK
101: LFTAKIMLLL NVGVFGVILL VTLLLFKGDK RVVMLGWICV GFSVSVFVAP LSIMRRVIQT KSMEYMPFSL SLSLTLSAVV WFLYGLLIKD KYVAAIILIE
201: FVLTTMLPNI LGFTFGMVQM VLYVLYMNKT PVAVAEGKDA GGKLPSAGDK HVLVNIAKLS PALPERSSGV HRATQMSAVP AKSCAAEATA PKVMLPNRDV
301: VDVFLSQALH RKQA
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.