CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES19554	endoplasmic reticulum
KXG33819	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21460.1	EES19554	AT1G21460.1	24027245
AT1G21460.1	KXG33819	AT1G21460.1	24027245

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038226_P001	Maize	golgi, plasma membrane, vacuole	91.41	93.6
Os05t0426000-01	Rice	plasma membrane	81.25	79.69
TraesCS1A01G265200.1	Wheat	golgi, plasma membrane, vacuole	80.47	78.63
TraesCS1D01G265400.1	Wheat	golgi, plasma membrane, vacuole	79.3	77.78
TraesCS1B01G276000.1	Wheat	golgi, plasma membrane, vacuole	79.3	77.78
KXG33819	Sorghum	extracellular, golgi	71.48	68.03
GSMUA_Achr11P...	Banana	golgi, plasma membrane	65.62	67.47
GSMUA_Achr5P01260_001	Banana	golgi, plasma membrane	64.45	64.2
Bra016421.1-P	Field mustard	golgi, plasma membrane	61.72	62.95
CDX96591	Canola	golgi, plasma membrane	61.72	62.95
AT1G21460.1	Thale cress	extracellular, golgi, plasma membrane	60.55	62.75
CDY67972	Canola	golgi, plasma membrane	61.33	62.55
CDY04628	Canola	extracellular, golgi	59.77	62.2
KRH64557	Soybean	extracellular, golgi	59.77	61.94
KRH15935	Soybean	plasma membrane	61.33	61.81
CDY50241	Canola	extracellular, golgi, plasma membrane	59.38	61.79
Bra017916.1-P	Field mustard	extracellular, golgi	59.38	61.79
KRH18105	Soybean	plasma membrane	59.38	61.29
VIT_18s0001g15330.t01	Wine grape	golgi, plasma membrane	58.98	60.89
Solyc04g064610.2.1	Tomato	plasma membrane	57.42	59.76
KRH53378	Soybean	golgi, plasma membrane	60.16	59.69
PGSC0003DMT400063855	Potato	plasma membrane	58.2	58.89
Solyc04g064620.2.1	Tomato	extracellular, golgi, plasma membrane	55.86	58.37
PGSC0003DMT400035874	Potato	golgi, plasma membrane	41.41	53.27
PGSC0003DMT400063850	Potato	plasma membrane	57.03	51.77
Solyc04g064640.2.1	Tomato	endoplasmic reticulum, golgi	49.22	51.64
Solyc06g060590.2.1	Tomato	plasma membrane	50.78	50.78
Solyc06g060580.1.1	Tomato	golgi, plasma membrane	49.61	50.6
PGSC0003DMT400095936	Potato	golgi, plasma membrane	45.7	50.21
PGSC0003DMT400035873	Potato	plasma membrane	50.0	50.0
Solyc04g064630.2.1	Tomato	golgi, plasma membrane	47.66	48.8
EES01331	Sorghum	endoplasmic reticulum, plasma membrane, plastid	40.23	44.59
EES20039	Sorghum	golgi, plasma membrane, vacuole	40.23	43.1
EES01039	Sorghum	plasma membrane	40.62	42.62
KXG32677	Sorghum	golgi, plasma membrane, vacuole	39.84	41.98
EES06723	Sorghum	golgi, plasma membrane, plastid	39.84	40.8
EES06744	Sorghum	golgi, plasma membrane, plastid	39.45	40.4
OQU86800	Sorghum	golgi, plasma membrane, vacuole	37.5	39.67
EES00047	Sorghum	plasma membrane	37.5	37.07
OQU84855	Sorghum	plasma membrane	36.72	35.88
KXG21564	Sorghum	plasma membrane	30.08	31.3
EER94881	Sorghum	golgi, plasma membrane	39.84	31.0
KXG28442	Sorghum	golgi, plasma membrane	34.38	30.45
EES15957	Sorghum	golgi, plasma membrane	35.55	30.13
OQU89754	Sorghum	plastid	31.25	29.3
EES17001	Sorghum	golgi, plasma membrane	33.98	28.62
OQU79094	Sorghum	plasma membrane	34.77	28.34
EES06868	Sorghum	golgi, plasma membrane, plastid	37.11	28.27
EES14183	Sorghum	plastid	32.42	26.86
EER92278	Sorghum	golgi, plasma membrane	32.42	26.52

Protein Annotations

Gene3D:1.20.1280.290	MapMan:24.2.6.1	EntrezGene:8077128	UniProt:C5YY79	EnsemblPlants:EES19554	ProteinID:EES19554
ProteinID:EES19554.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0016020	GO:GO:0016021	GO:GO:0034219
GO:GO:0051119	PFAM:PF03083	PANTHER:PTHR10791	PANTHER:PTHR10791:SF107	EnsemblPlantsGene:SORBI_3009G143500	InterPro:SWEET_sugar_transpr
TMHMM:TMhelix	UniParc:UPI0001A89417	RefSeq:XP_002441124.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:50086876..50090678

Molecular Weight (calculated)

27275.8 Da

IEP (calculated)

9.048

GRAVY (calculated)

0.675

Length

256 amino acids

Sequence
(BLAST)

001: MEDVVKFIFG ICGNVIALFL FLSPVPTFWR IIRRRSTEDF SGVPYNMTLL NCLLSAWYGL PFVSPNNILV STINGAGAAI EAVYVVIFLV FASSQRTRLR
101: MLGLASAVAA VFAAVALVSM LALHQGQGRK LMCGLAATVC SICMYASPLS IMRLVVKTKS VEYMPFLLSL AVFLCGTSWF VYGLLGRDPF VAIPNGCGSF
201: LGAVQLVLYA IYRNSAGTAG AGKQQAGDDV EMAADAKSSK KVADDVGGAG KEGRLV

Best Arabidopsis Sequence Match ( AT1G21460.1 )
(BLAST)

001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGAVIE TVYVLIFLFY APKKEKIKIF
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV

Arabidopsis Description

SWEET1Bidirectional sugar transporter SWEET1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9J7]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.