Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G21460.1 | EES19554 | AT1G21460.1 | 24027245 |
| AT1G21460.1 | KXG33819 | AT1G21460.1 | 24027245 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d000222_P001 | Maize | plasma membrane | 93.68 | 94.38 |
| Os01t0881300-02 | Rice | plasma membrane | 85.13 | 83.88 |
| TraesCS3A01G408200.1 | Wheat | golgi, plasma membrane | 84.01 | 83.39 |
| TraesCS3D01G403300.1 | Wheat | plasma membrane | 82.9 | 82.9 |
| TraesCS3B01G441800.1 | Wheat | golgi, plasma membrane | 83.64 | 82.12 |
| EES19554 | Sorghum | golgi, plasma membrane | 68.03 | 71.48 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane | 62.08 | 67.07 |
| KRH64557 | Soybean | extracellular, golgi | 59.85 | 65.18 |
| GSMUA_Achr5P01260_001 | Banana | golgi, plasma membrane | 62.08 | 64.98 |
| KRH15935 | Soybean | plasma membrane | 60.97 | 64.57 |
| KRH18105 | Soybean | plasma membrane | 59.11 | 64.11 |
| CDY04628 | Canola | extracellular, golgi | 57.62 | 63.01 |
| AT1G21460.1 | Thale cress | extracellular, golgi, plasma membrane | 57.62 | 62.75 |
| Bra017916.1-P | Field mustard | extracellular, golgi | 57.25 | 62.6 |
| CDY50241 | Canola | extracellular, golgi, plasma membrane | 57.25 | 62.6 |
| Bra016421.1-P | Field mustard | golgi, plasma membrane | 57.99 | 62.15 |
| CDX96591 | Canola | golgi, plasma membrane | 57.99 | 62.15 |
| CDY67972 | Canola | golgi, plasma membrane | 57.99 | 62.15 |
| VIT_18s0001g15330.t01 | Wine grape | golgi, plasma membrane | 57.25 | 62.1 |
| Solyc04g064620.2.1 | Tomato | extracellular, golgi, plasma membrane | 56.51 | 62.04 |
| KRH53378 | Soybean | golgi, plasma membrane | 59.48 | 62.02 |
| HORVU3Hr1G091230.10 | Barley | plasma membrane | 65.8 | 60.62 |
| Solyc04g064610.2.1 | Tomato | plasma membrane | 54.28 | 59.35 |
| PGSC0003DMT400063855 | Potato | plasma membrane | 55.39 | 58.89 |
| PGSC0003DMT400035874 | Potato | golgi, plasma membrane | 41.26 | 55.78 |
| PGSC0003DMT400063850 | Potato | plasma membrane | 57.62 | 54.96 |
| Solyc04g064630.2.1 | Tomato | golgi, plasma membrane | 49.07 | 52.8 |
| Solyc04g064640.2.1 | Tomato | endoplasmic reticulum, golgi | 47.21 | 52.05 |
| PGSC0003DMT400095936 | Potato | golgi, plasma membrane | 44.98 | 51.93 |
| Solyc06g060590.2.1 | Tomato | plasma membrane | 49.07 | 51.56 |
| Solyc06g060580.1.1 | Tomato | golgi, plasma membrane | 47.21 | 50.6 |
| PGSC0003DMT400035873 | Potato | plasma membrane | 47.21 | 49.61 |
| EES01039 | Sorghum | plasma membrane | 41.64 | 45.9 |
| EES20039 | Sorghum | golgi, plasma membrane, vacuole | 40.15 | 45.19 |
| EES01331 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 37.17 | 43.29 |
| KXG32677 | Sorghum | golgi, plasma membrane, vacuole | 38.66 | 42.8 |
| EES06723 | Sorghum | golgi, plasma membrane, plastid | 37.55 | 40.4 |
| EES06744 | Sorghum | golgi, plasma membrane, plastid | 37.55 | 40.4 |
| OQU86800 | Sorghum | golgi, plasma membrane, vacuole | 34.94 | 38.84 |
| EES00047 | Sorghum | plasma membrane | 35.69 | 37.07 |
| OQU84855 | Sorghum | plasma membrane | 34.57 | 35.5 |
| KXG21564 | Sorghum | plasma membrane | 29.37 | 32.11 |
| EES15957 | Sorghum | golgi, plasma membrane | 34.94 | 31.13 |
| KXG28442 | Sorghum | golgi, plasma membrane | 32.34 | 30.1 |
| EER94881 | Sorghum | golgi, plasma membrane | 36.8 | 30.09 |
| OQU89754 | Sorghum | plastid | 30.48 | 30.04 |
| EES17001 | Sorghum | golgi, plasma membrane | 33.83 | 29.93 |
| EES06868 | Sorghum | golgi, plasma membrane, plastid | 36.8 | 29.46 |
| OQU79094 | Sorghum | plasma membrane | 34.2 | 29.3 |
| EES14183 | Sorghum | plastid | 33.09 | 28.8 |
| EER92278 | Sorghum | golgi, plasma membrane | 30.11 | 25.88 |
Protein Annotations
| EMBL:CM000762 | EnsemblPlants:KXG33819 | EnsemblPlantsGene:SORBI_3003G377700 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF107 | PFAM:PF03083 | ProteinID:KXG33819 | ProteinID:KXG33819.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0001FCCC1E | UniProt:A0A1B6Q7C2 | MapMan:24.2.6.1 | : |
Description
SWEET1Ahypothetical protein
Coordinates
chr3:+:69196094..69199768
Molecular Weight (calculated)
29079.3 Da
IEP (calculated)
9.577
GRAVY (calculated)
0.805
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHIARFFFG VSGNVIALFL FLSPVVTFWR IIRKRSTEDF SGVPYNMTLL NCLLSAWYGL PFVSPNNILV STINGTGSVI EAIYVVIFLI FAVDRRARLR
101: MLGLLSIVVS IFATVVLVSL LALHGNARKV FCGLAATIFS ICMYASPLSI MRLVIKTKSV EYMPFLLSLA VFLCGTSWFI YGLLGRDPFI IIPNGCGSFL
201: GLVQLILYFI YRKNKGPAVP AGKGEAAAAA DVEDAKKVAA AVEMADATTT NKAAADTVVG DGKVVASQV
101: MLGLLSIVVS IFATVVLVSL LALHGNARKV FCGLAATIFS ICMYASPLSI MRLVIKTKSV EYMPFLLSLA VFLCGTSWFI YGLLGRDPFI IIPNGCGSFL
201: GLVQLILYFI YRKNKGPAVP AGKGEAAAAA DVEDAKKVAA AVEMADATTT NKAAADTVVG DGKVVASQV
001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGAVIE TVYVLIFLFY APKKEKIKIF
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
Arabidopsis Description
SWEET1Bidirectional sugar transporter SWEET1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9J7]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.