Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • plasma membrane 5
  • endoplasmic reticulum 3
  • extracellular 2
  • golgi 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:plasma membrane
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06868 plasma membrane
EES14183 plasma membrane
EES15957 plasma membrane
EES17001 plasma membrane
KXG28442 plasma membrane
OQU79094 plasma membrane
OQU89754 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 EES06868 AT3G48740.1 24027245
AT3G48740.1 EES14183 AT3G48740.1 24027245
AT3G48740.1 EES15957 AT3G48740.1 24027245
AT3G48740.1 EES17001 AT3G48740.1 24027245
AT3G48740.1 KXG28442 AT3G48740.1 24027245
AT3G48740.1 OQU79094 AT3G48740.1 24027245
AT3G48740.1 OQU89754 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021064_P001 Maize plasma membrane 89.74 84.78
TraesCS5A01G289200.1 Wheat plasma membrane 76.19 72.47
TraesCS5B01G288600.1 Wheat plasma membrane 75.82 72.13
TraesCS5D01G297100.1 Wheat plasma membrane 75.82 72.13
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 76.92 65.42
Os09t0508250-00 Rice extracellular, golgi 41.39 64.57
KRH63814 Soybean extracellular 20.88 58.76
EES14183 Sorghum plastid 66.3 58.58
CDY69440 Canola plasma membrane 42.12 53.74
GSMUA_Achr8P09230_001 Banana golgi, plasma membrane 50.18 48.75
GSMUA_AchrUn_... Banana golgi, plasma membrane 49.82 48.23
PGSC0003DMT400082699 Potato extracellular, plasma membrane 22.71 47.69
KRH01827 Soybean golgi, plasma membrane 45.79 46.64
KRH41097 Soybean golgi, plasma membrane 42.49 45.67
KRH46857 Soybean golgi, plasma membrane 45.05 45.05
KXG28442 Sorghum golgi, plasma membrane 47.62 44.98
KRH54140 Soybean plasma membrane 42.49 44.62
KRH54141 Soybean plasma membrane 42.12 44.57
KRH59785 Soybean endoplasmic reticulum, plasma membrane 41.76 44.36
KRH01828 Soybean plasma membrane 43.96 44.28
KRH63811 Soybean plasma membrane 41.76 44.19
VIT_17s0000g00820.t01 Wine grape plasma membrane 42.49 43.61
Bra013854.1-P Field mustard golgi, plasma membrane 43.59 43.59
Solyc03g097620.1.1 Tomato plasma membrane 43.96 43.48
Bra010477.1-P Field mustard golgi, plasma membrane 43.22 43.38
KRH46856 Soybean plasma membrane 43.22 43.38
EES15957 Sorghum golgi, plasma membrane 47.99 43.38
VIT_17s0000g00830.t01 Wine grape plasma membrane 42.86 43.33
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 43.22 43.22
CDY34333 Canola golgi, plasma membrane 43.22 43.22
CDY24854 Canola golgi, plasma membrane 42.86 43.17
Solyc06g072630.2.1 Tomato plasma membrane 45.42 42.91
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 31.14 42.71
CDX84877 Canola golgi, plasma membrane 42.49 42.65
CDX92666 Canola golgi, plasma membrane 42.49 42.49
CDY11047 Canola golgi, plasma membrane 42.49 42.49
Bra012412.1-P Field mustard plasma membrane 27.11 42.29
KRH10466 Soybean golgi, plasma membrane 38.46 42.17
EES17001 Sorghum golgi, plasma membrane 46.89 42.11
AT4G25010.1 Thale cress plasma membrane 43.22 41.99
PGSC0003DMT400011081 Potato plasma membrane 38.83 41.9
CDY25828 Canola mitochondrion, plasma membrane 26.74 41.71
OQU79094 Sorghum plasma membrane 47.62 41.4
GSMUA_Achr8P00620_001 Banana plasma membrane, vacuole 53.11 41.31
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 35.53 41.28
AT5G50800.1 Thale cress plasma membrane 44.32 41.16
Solyc06g072620.2.1 Tomato golgi, plasma membrane 42.86 40.77
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 41.76 40.43
AT5G13170.1 Thale cress plasma membrane 43.22 40.41
KRH42232 Soybean endoplasmic reticulum, plasma membrane 40.29 40.15
Bra022761.1-P Field mustard golgi, plasma membrane 42.49 40.14
Bra040489.1-P Field mustard golgi, plasma membrane 43.22 40.14
CDY05819 Canola golgi, plasma membrane 43.22 40.14
CDX71659 Canola golgi, plasma membrane 43.22 40.0
CDX97233 Canola golgi, plasma membrane 43.59 39.93
PGSC0003DMT400081210 Potato golgi, plasma membrane 43.22 39.86
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 40.29 39.71
CDX87161 Canola endoplasmic reticulum 40.29 39.71
Bra019560.1-P Field mustard plasma membrane 41.39 39.65
CDX77928 Canola plasma membrane 41.39 39.65
Solyc03g097610.2.1 Tomato golgi, plasma membrane 40.66 39.36
CDY16863 Canola endoplasmic reticulum, plasma membrane 39.93 39.35
Solyc05g024260.2.1 Tomato plasma membrane 42.49 39.32
CDX69663 Canola golgi, plasma membrane 42.86 39.26
CDX68492 Canola plasma membrane 41.03 39.16
CDX83046 Canola plasma membrane 41.03 39.16
PGSC0003DMT400081212 Potato golgi, plasma membrane 41.03 39.16
KRH54137 Soybean plasma membrane 44.32 39.16
KRH41096 Soybean golgi, plasma membrane 42.12 39.12
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 41.39 39.1
Bra018039.1-P Field mustard plasma membrane 41.39 39.1
CDY05867 Canola plasma membrane 41.39 39.1
CDY08093 Canola plasma membrane 41.39 39.1
Solyc03g097580.2.1 Tomato golgi, plasma membrane 43.22 39.07
CDY53626 Canola plasma membrane 41.39 38.83
CDX78511 Canola plasma membrane 41.39 38.7
Bra029914.1-P Field mustard plasma membrane 41.03 38.62
AT5G23660.1 Thale cress plasma membrane 40.29 38.6
Solyc03g097590.2.1 Tomato golgi, plasma membrane 42.12 38.59
KRH58347 Soybean golgi, plasma membrane 39.93 38.52
AT5G50790.1 Thale cress plasma membrane 40.66 38.41
Bra023394.1-P Field mustard plasma membrane 41.76 38.38
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 41.76 38.38
CDX91144 Canola plasma membrane 41.76 38.38
KRH43976 Soybean golgi, plasma membrane, plastid 39.19 38.21
CDY08964 Canola plastid 40.29 38.19
Solyc03g097870.2.1 Tomato golgi, plasma membrane 41.76 38.0
Solyc03g097600.2.1 Tomato golgi, plasma membrane 41.03 37.84
Bra019197.1-P Field mustard plasma membrane 32.97 37.82
Solyc03g097560.2.1 Tomato golgi, plasma membrane 40.66 37.63
Bra009700.1-P Field mustard plasma membrane 39.56 37.5
CDX88041 Canola plasma membrane 39.56 37.5
EES06868 Sorghum golgi, plasma membrane, plastid 46.15 37.5
PGSC0003DMT400083992 Potato golgi, plasma membrane 41.03 37.33
GSMUA_Achr11P... Banana plasma membrane, vacuole 45.42 37.24
PGSC0003DMT400081206 Potato golgi, plasma membrane 39.93 37.2
CDX80379 Canola plasma membrane 39.19 37.15
PGSC0003DMT400081211 Potato golgi, plasma membrane 39.93 36.82
EER92278 Sorghum golgi, plasma membrane 42.12 36.74
KRH59783 Soybean golgi, plasma membrane 30.77 35.59
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 39.19 35.2
GSMUA_AchrUn_... Banana plasma membrane 32.23 34.78
Solyc06g072640.1.1 Tomato plasma membrane 35.16 34.04
EES20039 Sorghum golgi, plasma membrane, vacuole 28.94 33.05
OQU86800 Sorghum golgi, plasma membrane, vacuole 28.57 32.23
EES01331 Sorghum endoplasmic reticulum, plasma membrane, plastid 27.11 32.03
EES01039 Sorghum plasma membrane 28.57 31.97
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 36.63 31.65
EES19554 Sorghum golgi, plasma membrane 29.3 31.25
EES06723 Sorghum golgi, plasma membrane, plastid 28.21 30.8
EES00047 Sorghum plasma membrane 28.94 30.5
PGSC0003DMT400021966 Potato mitochondrion 22.34 30.5
KXG21564 Sorghum plasma membrane 27.47 30.49
KXG33819 Sorghum extracellular, golgi 30.04 30.48
EES06744 Sorghum golgi, plasma membrane, plastid 27.84 30.4
Bra008850.1-P Field mustard plasma membrane 23.08 30.14
KXG32677 Sorghum golgi, plasma membrane, vacuole 25.64 28.81
OQU84855 Sorghum plasma membrane 25.64 26.72
EER94881 Sorghum golgi, plasma membrane 28.21 23.4
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1EntrezGene:8054794UniProt:A0A1W0W5R6GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
EnsemblPlants:OQU89754ProteinID:OQU89754ProteinID:OQU89754.1PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF37
EnsemblPlantsGene:SORBI_3002G259301InterPro:SWEET_sugar_transprTMHMM:TMhelixUniParc:UPI0001A83C0ERefSeq:XP_002462642.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:64460064..64461900
Molecular Weight (calculated)
29755.3 Da
IEP (calculated)
8.969
GRAVY (calculated)
0.979
Length
273 amino acids
Sequence
(BLAST)
001: MAGGLFSMEH PWVSAFGILG NIISFLVFLA PVPTFLRVYR KKSTEGFSSV PYVVALFSCT LWILYAVVKT NSSPLLTINA FGCVVEATYI LLYLIYAPRA
101: ARLRALAFFF LLDVAALALI VVVVVVLVAE PHRVKVLGSI CLAFSMAVFV APLSVIFVVI RTKSAEFMPF TLSFFLTLSA VAWFLYGIFT KDPYVTLPNV
201: GGFFFGCIQM VLYCCYRKPS ASVVLPTTTD AAATEMELPL AAHQAVAPVL AELQKLEEAM GSPRKHGGVV KVV
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.