Factsheet for GSMUA_Achr3P18700_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...	plasma membrane
GSMUA_Achr11P...	plasma membrane
GSMUA_Achr3P18700_001	plasma membrane
GSMUA_Achr6P07950_001	plasma membrane
GSMUA_Achr6P23850_001	plasma membrane
GSMUA_Achr8P00620_001	plasma membrane
GSMUA_Achr8P09230_001	plasma membrane
GSMUA_AchrUn_...	plasma membrane
GSMUA_AchrUn_...	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48740.1	GSMUA_Achr10P...	AT3G48740.1	24027245
AT3G48740.1	GSMUA_Achr11P...	AT3G48740.1	24027245
AT3G48740.1	GSMUA_Achr3P18700_001	AT3G48740.1	24027245
AT3G48740.1	GSMUA_Achr6P07950_001	AT3G48740.1	24027245
AT3G48740.1	GSMUA_Achr6P23850_001	AT3G48740.1	24027245
AT3G48740.1	GSMUA_Achr8P00620_001	AT3G48740.1	24027245
AT3G48740.1	GSMUA_Achr8P09230_001	AT3G48740.1	24027245
AT3G48740.1	GSMUA_AchrUn_...	AT3G48740.1	24027245
AT3G48740.1	GSMUA_AchrUn_...	AT3G48740.1	24027245

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P23850_001	Banana	golgi, plasma membrane	71.53	73.09
TraesCS6B01G421600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.11	72.25
GSMUA_Achr6P07950_001	Banana	golgi, plasma membrane	70.46	68.75
KRH63814	Soybean	extracellular	22.78	65.98
CDY69440	Canola	plasma membrane	48.04	63.08
KXG28442	Sorghum	golgi, plasma membrane	62.63	60.9
GSMUA_Achr10P...	Banana	plasma membrane	71.89	60.48
TraesCS6A01G009000.1	Wheat	plasma membrane	60.85	59.58
TraesCS6D01G009700.1	Wheat	plasma membrane	60.85	59.58
HORVU6Hr1G000440.3	Barley	golgi, plasma membrane	61.92	59.18
TraesCS6A01G009100.1	Wheat	plasma membrane	61.21	59.11
Zm00001d049252_P001	Maize	plasma membrane	61.57	59.04
TraesCS6B01G015300.1	Wheat	golgi, plasma membrane, vacuole	59.79	58.54
TraesCS6D01G009600.1	Wheat	plasma membrane	60.85	58.36
Os11t0508600-01	Rice	golgi, plasma membrane	62.63	58.09
TraesCS6B01G015200.1	Wheat	plasma membrane	60.5	57.82
HORVU1Hr1G010210.2	Barley	plasma membrane	59.79	57.53
TraesCS6B01G015100.1	Wheat	plasma membrane	60.14	57.48
TraesCS6D01G012100.1	Wheat	plasma membrane	60.14	57.48
Zm00001d041067_P001	Maize	plasma membrane	60.14	57.29
TraesCS1B01G066900.1	Wheat	plasma membrane	59.07	57.24
VIT_17s0000g00830.t01	Wine grape	plasma membrane	54.8	57.04
TraesCS1A01G050400.1	Wheat	plasma membrane	59.07	56.66
TraesCS6D01G367300.1	Wheat	golgi, plasma membrane, vacuole	57.3	56.49
Zm00001d023673_P001	Maize	plasma membrane	60.5	56.48
HORVU6Hr1G089540.2	Barley	golgi, plasma membrane	58.01	56.4
TraesCS6B01G421800.1	Wheat	plasma membrane	58.01	56.21
TraesCS1D01G052700.1	Wheat	plasma membrane	59.07	56.08
EES15957	Sorghum	golgi, plasma membrane	60.14	55.96
Zm00001d023677_P001	Maize	plasma membrane	60.14	55.96
TraesCS6D01G367200.1	Wheat	plasma membrane	57.3	55.9
TraesCSU01G206000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	59.43	55.85
EES17001	Sorghum	golgi, plasma membrane	60.14	55.59
TraesCS6D01G009500.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	59.07	55.52
TraesCS6A01G382600.1	Wheat	plasma membrane	57.3	55.52
Os12t0476200-01	Rice	extracellular, golgi	58.36	55.41
TraesCS6D01G367400.1	Wheat	plasma membrane	56.94	55.17
TraesCS6B01G421500.1	Wheat	plasma membrane	57.65	55.1
TraesCS6A01G382400.1	Wheat	plasma membrane	57.65	54.92
TraesCS6B01G421700.1	Wheat	plasma membrane	54.8	54.04
Solyc03g097620.1.1	Tomato	plasma membrane	52.31	53.26
KRH54141	Soybean	plasma membrane	48.75	53.1
KRH63811	Soybean	plasma membrane	48.75	53.1
KRH54140	Soybean	plasma membrane	49.11	53.08
PGSC0003DMT400011081	Potato	plasma membrane	47.69	52.96
OQU79094	Sorghum	plasma membrane	59.07	52.87
KRH41097	Soybean	golgi, plasma membrane	47.69	52.76
GSMUA_Achr8P09230_001	Banana	golgi, plasma membrane	52.31	52.31
KRH59785	Soybean	endoplasmic reticulum, plasma membrane	47.69	52.14
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	52.31	52.13
KRH01828	Soybean	plasma membrane	49.47	51.29
KRH01827	Soybean	golgi, plasma membrane	48.75	51.12
KRH42232	Soybean	endoplasmic reticulum, plasma membrane	49.47	50.73
Zm00001d007365_P001	Maize	endoplasmic reticulum	61.92	50.58
CDX84877	Canola	golgi, plasma membrane	48.75	50.37
KRH46856	Soybean	plasma membrane	48.75	50.37
VIT_01s0146g00260.t01	Wine grape	golgi, plasma membrane	41.99	50.21
KRH46857	Soybean	golgi, plasma membrane	48.75	50.18
Solyc06g072620.2.1	Tomato	golgi, plasma membrane	51.25	50.17
GSMUA_Achr3P08960_001	Banana	plasma membrane	46.26	49.81
KRH63812	Soybean	endoplasmic reticulum, golgi, plasma membrane	49.82	49.65
CDX92666	Canola	golgi, plasma membrane	48.04	49.45
PGSC0003DMT400011076	Potato	golgi, mitochondrion, plasma membrane, plastid	34.88	49.25
PGSC0003DMT400082699	Potato	extracellular, plasma membrane	22.78	49.23
Bra012412.1-P	Field mustard	plasma membrane	30.61	49.14
KRH58347	Soybean	golgi, plasma membrane	49.47	49.12
CDY11047	Canola	golgi, plasma membrane	47.69	49.08
CDY24854	Canola	golgi, plasma membrane	47.33	49.08
Bra010477.1-P	Field mustard	golgi, plasma membrane	47.33	48.9
Bra026487.1-P	Field mustard	endoplasmic reticulum, plasma membrane	48.04	48.74
Bra013854.1-P	Field mustard	golgi, plasma membrane	47.33	48.72
CDY03395	Canola	endoplasmic reticulum, golgi, plasma membrane	47.33	48.72
CDY34333	Canola	golgi, plasma membrane	47.33	48.72
CDY25828	Canola	mitochondrion, plasma membrane	30.25	48.57
CDX87161	Canola	endoplasmic reticulum	47.69	48.38
PGSC0003DMT400081212	Potato	golgi, plasma membrane	49.11	48.25
Solyc06g072630.2.1	Tomato	plasma membrane	49.47	48.1
Bra019560.1-P	Field mustard	plasma membrane	48.75	48.07
CDX77928	Canola	plasma membrane	48.75	48.07
CDY16863	Canola	endoplasmic reticulum, plasma membrane	47.33	48.01
CDX68492	Canola	plasma membrane	48.75	47.9
CDX83046	Canola	plasma membrane	48.75	47.9
Solyc03g097610.2.1	Tomato	golgi, plasma membrane	48.04	47.87
Bra022761.1-P	Field mustard	golgi, plasma membrane	49.11	47.75
AT4G25010.1	Thale cress	plasma membrane	47.69	47.69
Bra029914.1-P	Field mustard	plasma membrane	48.75	47.24
AT5G50790.1	Thale cress	plasma membrane	48.4	47.06
Bra018039.1-P	Field mustard	plasma membrane	48.4	47.06
CDY05867	Canola	plasma membrane	48.4	47.06
CDY08093	Canola	plasma membrane	48.4	47.06
AT3G48740.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	48.04	46.71
PGSC0003DMT400081210	Potato	golgi, plasma membrane	49.11	46.62
AT5G23660.1	Thale cress	plasma membrane	46.98	46.32
Bra019197.1-P	Field mustard	plasma membrane	39.15	46.22
Solyc03g097560.2.1	Tomato	golgi, plasma membrane	48.4	46.1
PGSC0003DMT400081206	Potato	golgi, plasma membrane	48.04	46.08
Solyc03g097580.2.1	Tomato	golgi, plasma membrane	49.47	46.03
Solyc03g097600.2.1	Tomato	golgi, plasma membrane	48.4	45.95
AT5G50800.1	Thale cress	plasma membrane	48.04	45.92
KRH10466	Soybean	golgi, plasma membrane	40.57	45.78
HORVU6Hr1G089600.1	Barley	golgi, mitochondrion, peroxisome	57.3	45.74
PGSC0003DMT400081211	Potato	golgi, plasma membrane	48.04	45.61
Bra040489.1-P	Field mustard	golgi, plasma membrane	47.69	45.58
CDY05819	Canola	golgi, plasma membrane	47.69	45.58
CDX71659	Canola	golgi, plasma membrane	47.69	45.42
Bra009700.1-P	Field mustard	plasma membrane	46.26	45.14
CDX88041	Canola	plasma membrane	46.26	45.14
VIT_17s0000g00820.t01	Wine grape	plasma membrane	42.7	45.11
CDX78511	Canola	plasma membrane	46.62	44.86
CDX80379	Canola	plasma membrane	45.91	44.79
CDX91144	Canola	plasma membrane	47.33	44.78
Bra023394.1-P	Field mustard	plasma membrane	46.98	44.44
CDX85668	Canola	endoplasmic reticulum, golgi, plasma membrane	46.98	44.44
Solyc05g024260.2.1	Tomato	plasma membrane	46.62	44.41
KRH54137	Soybean	plasma membrane	48.75	44.34
Solyc03g097870.2.1	Tomato	golgi, plasma membrane	47.33	44.33
Solyc03g097590.2.1	Tomato	golgi, plasma membrane	46.98	44.3
AT5G13170.1	Thale cress	plasma membrane	45.91	44.18
PGSC0003DMT400083992	Potato	golgi, plasma membrane	46.98	44.0
CDX69663	Canola	golgi, plasma membrane	46.62	43.96
CDX97233	Canola	golgi, plasma membrane	46.62	43.96
Solyc03g097570.2.1	Tomato	cytosol, golgi, plasma membrane	46.98	43.42
TraesCS6A01G382500.1	Wheat	plasma membrane	47.33	43.32
GSMUA_Achr9P17640_001	Banana	golgi, plasma membrane, vacuole	41.99	43.07
CDY53626	Canola	plasma membrane	44.48	42.96
GSMUA_Achr8P00620_001	Banana	plasma membrane, vacuole	53.38	42.73
KRH41096	Soybean	golgi, plasma membrane	44.48	42.52
KRH43976	Soybean	golgi, plasma membrane, plastid	42.35	42.5
CDY08964	Canola	plastid	42.7	41.67
Solyc06g072640.1.1	Tomato	plasma membrane	40.57	40.43
GSMUA_Achr3P08120_001	Banana	golgi, plasma membrane, vacuole	28.83	39.71
KRH59783	Soybean	golgi, plasma membrane	33.1	39.41
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	46.26	39.04
Bra008850.1-P	Field mustard	plasma membrane	28.47	38.28
GSMUA_AchrUn_...	Banana	plasma membrane	34.16	37.94
Bra006185.1-P	Field mustard	golgi, plasma membrane, plastid	41.99	37.34
PGSC0003DMT400021966	Potato	mitochondrion	25.62	36.0
GSMUA_Achr5P01260_001	Banana	golgi, plasma membrane	32.38	35.41
GSMUA_Achr8P10260_001	Banana	plasma membrane	30.61	35.39
GSMUA_Achr11P...	Banana	golgi, plasma membrane	31.32	35.34
GSMUA_Achr10P...	Banana	extracellular, golgi, plasma membrane	27.05	32.48
GSMUA_Achr6P09180_001	Banana	plasma membrane	27.05	32.34
GSMUA_Achr1P25290_001	Banana	plasma membrane, plastid	27.05	31.67
GSMUA_Achr10P...	Banana	golgi, plasma membrane, plastid	28.11	30.38
GSMUA_Achr7P14690_001	Banana	golgi, plasma membrane, plastid	28.11	30.15
GSMUA_Achr8P25010_001	Banana	plastid	26.69	29.76
GSMUA_Achr1P12680_001	Banana	nucleus	27.76	28.26
GSMUA_Achr11P...	Banana	plasma membrane	28.47	27.03
GSMUA_Achr4P09090_001	Banana	plasma membrane	25.98	24.33
GSMUA_Achr3P32170_001	Banana	cytosol, peroxisome, plasma membrane	24.91	20.83

Protein Annotations

EnsemblPlants:GSMUA_Achr3P18700_001	EnsemblPlants:GSMUA_Achr3T18700_001	EnsemblPlantsGene:GSMUA_Achr3G18700_001	Gene3D:1.20.1280.290	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0016020	GO:GO:0016021
InterPro:SWEET10	InterPro:SWEET_sugar_transpr	PANTHER:PTHR10791	PANTHER:PTHR10791:SF22	PFAM:PF03083	SEG:seg
TMHMM:TMhelix	UniParc:UPI000295FF0D	UniProt:M0SFT6	MapMan:24.2.6.1	:	:

Description

Putative Protein RUPTURED POLLEN GRAIN 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G18700_001]

Coordinates

chr3:+:20106081..20107553

Molecular Weight (calculated)

31386.2 Da

IEP (calculated)

9.515

GRAVY (calculated)

0.628

Length

281 amino acids

Sequence
(BLAST)

001: MAGLSLDHPW AFTFGILGNI ISFMVYLAPL PTFYRVCRRK STEGFHSVPY VVALFSATLW IFYAFLKTNA GLLITINAVG CVIETAYVVV YFTYAPKAAK
101: MFTAKLVLLV NVGMFGLILV LTLLFARGAK RVEVLGWICM SFSVSVFVAP LSIIRLVIRT KSVEFMPFSL SFFLTWSAVV WFGYGLLTKD LYVALPNVLG
201: FIFGVLQMVL YVAYRNKDKA MVEQKLPEHI ASKLGTAEKV LEIYAIGVEE KVPNRAQEEQ EEDKQGVAAA PMEKKMKPAE V

Best Arabidopsis Sequence Match ( AT5G23660.1 )
(BLAST)

001: MALFDTHNTW AFVFGLLGNL ISFAVFLSPV PTFYRICKKK TTEGFQSIPY VVALFSAMLW LYYATQKKDV FLLVTINSFG CFIETIYISI FVAFASKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT KSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVIG
201: FVLGALQMIL YVVYKYCKTP SDLVEKELEA AKLPEVSIDM VKLGTLTSPE PVAITVVRSV NTCNCNDRNA EIENGQGVRN SAATT

Arabidopsis Description

SWEET12Bidirectional sugar transporter SWEET12 [Source:UniProtKB/Swiss-Prot;Acc:O82587]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.