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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27020 Canola golgi, plasma membrane 100.0 100.0
AT5G53190.1 Thale cress plasma membrane 82.63 81.37
Bra003075.1-P Field mustard golgi, plasma membrane, plastid 57.92 78.12
VIT_16s0050g02540.t01 Wine grape plasma membrane 62.93 65.46
KRH64501 Soybean golgi, plasma membrane 40.93 60.92
Solyc03g007360.2.1 Tomato golgi, plasma membrane 58.69 59.14
PGSC0003DMT400023436 Potato golgi, plasma membrane 33.98 56.05
KRH16514 Soybean plasma membrane 54.05 55.12
KRH53444 Soybean golgi, plasma membrane 54.05 55.12
KRH18150 Soybean endoplasmic reticulum, plasma membrane, plastid 54.05 54.9
KRH16511 Soybean golgi, plasma membrane 51.35 51.15
EES00047 Sorghum plasma membrane 50.58 50.58
TraesCS1D01G125900.2 Wheat plasma membrane 45.95 48.37
TraesCS1B01G147200.1 Wheat plasma membrane 45.56 47.97
TraesCS1A01G129600.1 Wheat plasma membrane 45.56 47.97
HORVU1Hr1G029920.4 Barley plasma membrane 44.79 46.77
Bra017916.1-P Field mustard extracellular, golgi 40.93 43.09
KXG21564 Sorghum plasma membrane 40.54 42.68
Os05t0214300-00 Rice golgi, plasma membrane 42.08 41.92
Zm00001d039347_P001 Maize endoplasmic reticulum, golgi, mitochondrion, plasma membrane 42.86 41.89
Zm00001d010440_P001 Maize extracellular, golgi, plasma membrane 38.22 41.6
Bra016421.1-P Field mustard golgi, plasma membrane 39.38 40.64
Bra025317.1-P Field mustard plasma membrane 37.07 38.71
Bra025595.1-P Field mustard plasma membrane 35.14 38.24
Bra000725.1-P Field mustard plasma membrane 26.25 38.2
Bra027314.1-P Field mustard plasma membrane 31.66 38.14
Bra021577.1-P Field mustard plasma membrane 34.75 38.14
Bra033034.1-P Field mustard plasma membrane 35.91 37.96
Bra035270.1-P Field mustard plasma membrane 35.91 37.35
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 32.43 35.0
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 32.43 35.0
Bra001638.1-P Field mustard plasma membrane 30.89 34.63
Bra012752.1-P Field mustard extracellular, golgi, vacuole 32.05 34.58
Bra021190.1-P Field mustard plasma membrane 30.5 34.2
Bra029244.1-P Field mustard plasma membrane 30.89 33.33
Bra012412.1-P Field mustard plasma membrane 22.01 32.57
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 27.8 29.51
Bra000116.1-P Field mustard golgi, plasma membrane 30.12 28.89
Bra010477.1-P Field mustard golgi, plasma membrane 29.34 27.94
Bra013854.1-P Field mustard golgi, plasma membrane 29.34 27.84
Bra023394.1-P Field mustard plasma membrane 31.66 27.61
Bra019560.1-P Field mustard plasma membrane 30.12 27.37
Bra022761.1-P Field mustard golgi, plasma membrane 30.12 26.99
Bra018039.1-P Field mustard plasma membrane 30.12 26.99
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 28.57 26.71
Bra029914.1-P Field mustard plasma membrane 29.34 26.21
Bra040489.1-P Field mustard golgi, plasma membrane 29.73 26.19
Bra009700.1-P Field mustard plasma membrane 28.57 25.69
Bra019197.1-P Field mustard plasma membrane 22.39 24.37
Bra008850.1-P Field mustard plasma membrane 18.53 22.97
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 27.8 22.78
Bra008206.1-P Field mustard nucleus 1.16 5.45
Protein Annotations
EnsemblPlants:Bra022636.1EnsemblPlants:Bra022636.1-PEnsemblPlantsGene:Bra022636Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF28PFAM:PF03083SEG:segTMHMM:TMhelix
UniParc:UPI0002546C11UniProt:M4E1I6MapMan:24.2.6.1:::
Description
AT5G53190 (E=2e-094) | nodulin MtN3 family protein
Coordinates
chrA02:+:8387024..8388481
Molecular Weight (calculated)
29329.4 Da
IEP (calculated)
8.774
GRAVY (calculated)
0.467
Length
259 amino acids
Sequence
(BLAST)
001: MGDKLRLFIG ILGNGASMLL YTAPILTFSR VFKKKSTEEF SCFPYVMTLL NCLIYTWYGL PIVSHLWENL PLVTINGVGI FLESLFIFIY FYYSSPKEKV
101: KVGVIFVPVV VVLFGLTAVI SAVVFDEPRH RKSFVGSVGL VASISMYGSP LVVMKKVIET KSVEYMPFYL SFFSFLASSL WLAYGLLSHD LFLASPNMVG
201: TPLGILQLIL YCKYKNKETP IITTVMSKWD DEKNKRELEL VVDVDHDGHA KEKKFNYAC
Best Arabidopsis Sequence Match ( AT5G53190.1 )
(BLAST)
001: MGDKLRLSIG ILGNGASLLL YTAPIVTFSR VFKKKSTEEF SCFPYVMTLF NCLIYTWYGL PIVSHLWENL PLVTINGVGI LLESIFIFIY FYYASPKEKI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI
Arabidopsis Description
SWEET3Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178U9N2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.