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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90555 Canola golgi, plasma membrane, vacuole 99.17 99.17
AT4G15920.1 Thale cress plasma membrane 90.42 90.04
Bra021190.1-P Field mustard plasma membrane 72.08 74.89
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 75.83 74.59
Bra001638.1-P Field mustard plasma membrane 71.25 74.03
VIT_05s0077g02260.t01 Wine grape golgi, plasma membrane, vacuole 60.0 61.8
KRH12074 Soybean plasma membrane 59.58 58.37
KRH37080 Soybean plasma membrane 58.33 57.38
Solyc01g099870.1.1 Tomato plasma membrane, vacuole 43.33 55.91
PGSC0003DMT400063714 Potato plasma membrane 50.42 51.05
OQU86800 Sorghum golgi, plasma membrane, vacuole 51.25 50.83
Zm00001d040656_P002 Maize golgi, plasma membrane, vacuole 47.92 50.66
Zm00001d009071_P002 Maize plasma membrane 50.42 50.63
GSMUA_Achr8P10260_001 Banana plasma membrane 51.25 50.62
TraesCS5B01G040700.1 Wheat golgi, plasma membrane, vacuole 50.42 49.39
TraesCS5D01G046300.1 Wheat plasma membrane 48.75 47.76
TraesCS5A01G038900.1 Wheat plasma membrane 49.58 47.6
TraesCS5A01G039000.1 Wheat plasma membrane 47.5 45.6
TraesCS5B01G040800.1 Wheat plasma membrane 50.42 44.98
HORVU0Hr1G010080.2 Barley plasma membrane 49.17 43.87
TraesCS5D01G046400.1 Wheat plasma membrane 48.33 43.12
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 38.75 38.75
GSMUA_Achr11P... Banana plasma membrane 47.08 38.18
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 37.5 37.5
Bra033034.1-P Field mustard plasma membrane 37.5 36.73
Bra029244.1-P Field mustard plasma membrane 36.67 36.67
Bra000725.1-P Field mustard plasma membrane 27.08 36.52
Bra025317.1-P Field mustard plasma membrane 37.5 36.29
Bra016421.1-P Field mustard golgi, plasma membrane 37.5 35.86
Bra017916.1-P Field mustard extracellular, golgi 36.67 35.77
Bra035270.1-P Field mustard plasma membrane 36.25 34.94
Bra025595.1-P Field mustard plasma membrane 34.58 34.87
Bra012412.1-P Field mustard plasma membrane 25.0 34.29
Bra022636.1-P Field mustard golgi, plasma membrane 34.58 32.05
Bra021577.1-P Field mustard plasma membrane 31.25 31.78
Bra010477.1-P Field mustard golgi, plasma membrane 35.83 31.62
Bra013854.1-P Field mustard golgi, plasma membrane 35.0 30.77
Bra000116.1-P Field mustard golgi, plasma membrane 34.58 30.74
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 34.17 29.6
Bra019560.1-P Field mustard plasma membrane 34.58 29.12
Bra009700.1-P Field mustard plasma membrane 34.58 28.82
Bra018039.1-P Field mustard plasma membrane 34.58 28.72
Bra023394.1-P Field mustard plasma membrane 35.42 28.62
Bra040489.1-P Field mustard golgi, plasma membrane 35.0 28.57
Bra029914.1-P Field mustard plasma membrane 34.17 28.28
Bra003075.1-P Field mustard golgi, plasma membrane, plastid 22.5 28.12
Bra022761.1-P Field mustard golgi, plasma membrane 33.33 27.68
Bra027314.1-P Field mustard plasma membrane 24.58 27.44
Bra019197.1-P Field mustard plasma membrane 26.67 26.89
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 31.25 23.73
Bra008850.1-P Field mustard plasma membrane 18.33 21.05
Bra008206.1-P Field mustard nucleus 3.33 14.55
Protein Annotations
EnsemblPlants:Bra012752.1EnsemblPlants:Bra012752.1-PEnsemblPlantsGene:Bra012752Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF29PFAM:PF03083TMHMM:TMhelixUniParc:UPI000254084A
UniProt:M4D8E2MapMan:24.2.6.1::::
Description
AT4G15920 (E=3e-121) | INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3 and saliva related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), MtN3 and saliva related transmembrane protein (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 546 Blast hits to 527 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Coordinates
chrA03:-:22428768..22431653
Molecular Weight (calculated)
26445.5 Da
IEP (calculated)
8.900
GRAVY (calculated)
0.609
Length
240 amino acids
Sequence
(BLAST)
001: MAETSFYIGV IGNVISVLVF LSPVETFWKI VKRKSTEDYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGSFVEII YVSLFLIYAP RHLKLNTIVV
101: VALLNVFFPI AAIAATRSAF KDEKMRSQSM GFICAGLNIV MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA SLQHDVFLLV PNGVGFVFGT
201: IQLILYGIYR NAKPAGLSNG SSEIAADEEE GLTSRAPLLS
Best Arabidopsis Sequence Match ( AT4G15920.1 )
(BLAST)
001: MAEASFYIGV IGNVISVLVF LSPVETFWKI VKRRSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVETI YVSLFLFYAP RHLKLKTVDV
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
Arabidopsis Description
SWEET17Nodulin MtN3 family protein [Source:TAIR;Acc:AT4G15920]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.