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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid, vacuole

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 3
  • nucleus 1
  • extracellular 2
  • vacuole 3
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plastid, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27798 Canola endoplasmic reticulum, golgi, plastid, vacuole 96.36 97.55
Bra001137.1-P Field mustard endoplasmic reticulum, extracellular, golgi 90.3 92.83
AT3G05100.1 Thale cress plastid 86.97 85.42
VIT_14s0030g01370.t01 Wine grape mitochondrion 58.79 80.5
Bra009981.1-P Field mustard plastid 79.09 79.57
Solyc01g098040.2.1 Tomato endoplasmic reticulum, plasma membrane 70.91 72.0
PGSC0003DMT400057857 Potato endoplasmic reticulum, golgi 70.3 71.38
KRH76204 Soybean mitochondrion 71.52 68.01
KRH65337 Soybean golgi 71.21 67.72
HORVU2Hr1G020730.4 Barley plastid 56.67 64.04
GSMUA_Achr5P11510_001 Banana endoplasmic reticulum, golgi 62.12 61.56
Os07t0667400-01 Rice endoplasmic reticulum, golgi 61.82 60.35
Zm00001d007108_P001 Maize plasma membrane 63.03 59.94
KXG36887 Sorghum endoplasmic reticulum, golgi 63.03 59.77
TraesCS2A01G119500.1 Wheat endoplasmic reticulum, golgi, vacuole 61.21 59.41
TraesCS2B01G140200.1 Wheat endoplasmic reticulum, golgi, vacuole 60.61 59.17
GSMUA_Achr1P02350_001 Banana endoplasmic reticulum, golgi 62.12 58.74
TraesCS2D01G121300.1 Wheat cytosol, endoplasmic reticulum, nucleus, plastid 60.91 49.63
Protein Annotations
EnsemblPlants:Bra039463.1EnsemblPlants:Bra039463.1-PEnsemblPlantsGene:Bra039463Gene3D:3.40.50.150InterPro:SAM-dependent_MTasesPANTHER:PTHR37886
SEG:segSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0002547498UniProt:M4FEE2MapMan:35.2
Description
AT3G05100 (E=8e-146) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); Has 53 Blast hits to 53 proteins in 21 species: Archae - 2; Bacteria - 27; Metazoa - 0; Fungi - 3; Plants - 11; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Coordinates
chrA05:-:23454614..23456280
Molecular Weight (calculated)
37245.7 Da
IEP (calculated)
7.613
GRAVY (calculated)
-0.225
Length
330 amino acids
Sequence
(BLAST)
001: MAFLSSSSPT MQKGIFVSVP VLVLSVSFAA AVIFLLTSSL SSCSCPSSVS SPNDVVGSVS DVRLEERIST TREDIEWVRD LIRSNGLHMQ KNELRKGINP
101: RTRDQQLADL IQYKGISHYE GEEEANNHTA LPCPGELLVE QHHSNYGEPW AGGRDVFEFL AQSSNLKPNS RVLEIGCGTL RVGLHFIRYL NPTHFHCLEK
201: DELSLMAALR YELPSQGLLH KRPRILRGDD MEFSKFGLDT SYDLIYASAV FLHMPDKLVW TGLERLVKKL KPYDGRIFVS HNVKFCSRLG GDECAKKLAS
301: LGLEYLGKQT HDSLLFNHYE IWFGFRRVKP
Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)
001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.