Factsheet for VIT_14s0030g01370.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86183	Canola	cytosol	24.9	77.92
CDY53229	Canola	cytosol	14.94	72.0
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	87.14	64.62
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	86.72	64.31
Bra001137.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	82.57	61.99
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	80.91	61.51
CDX74152	Canola	plastid	82.99	60.79
CDY40697	Canola	endoplasmic reticulum, golgi, plastid, vacuole	82.57	60.67
HORVU2Hr1G020730.4	Barley	plastid	73.44	60.62
KRH76204	Soybean	mitochondrion	87.14	60.52
KRH65337	Soybean	golgi	86.72	60.23
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	80.91	59.82
Bra009981.1-P	Field mustard	plastid	81.33	59.76
CDX80677	Canola	plastid	80.91	59.27
Bra039463.1-P	Field mustard	endoplasmic reticulum, golgi, plastid, vacuole	80.5	58.79
AT3G05100.1	Thale cress	plastid	80.08	57.44
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	78.01	56.46
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	78.42	55.92
KXG36887	Sorghum	endoplasmic reticulum, golgi	78.42	54.31
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	78.42	54.15
Zm00001d007108_P001	Maize	plasma membrane	77.59	53.89
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	73.86	52.35
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	73.03	52.07
CDX86182	Canola	plastid	42.74	46.61
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	73.86	43.95

Protein Annotations

EntrezGene:100265858	wikigene:100265858	Gene3D:3.40.50.150	MapMan:35.2	EMBL:AM434302	ProteinID:CAN76021
ProteinID:CAN76021.1	ProteinID:CBI34236	ProteinID:CBI34236.3	UniProt:D7TUR1	EMBL:FN596249	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100265858	wikigene:LOC100265858	PANTHER:PTHR37886	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	TIGR:TC64406	TIGR:TC70561	UniParc:UPI0001BE42C8	ArrayExpress:VIT_14s0030g01370	EnsemblPlantsGene:VIT_14s0030g01370
EnsemblPlants:VIT_14s0030g01370.t01	unigene:Vvi.1423	RefSeq:XP_002274268	RefSeq:XP_002274268.1	:	:

Description

No Description!

Coordinates

chr14:+:5971017..5973267

Molecular Weight (calculated)

27865.3 Da

IEP (calculated)

6.701

GRAVY (calculated)

-0.366

Length

241 amino acids

Sequence
(BLAST)

001: MQDNVLRKGI NPRTRQQQLQ DLIEFKGISH YEEPGEGNHT ALPCPGELLV EEHHSNYGEP WAGGRDVFEF IAESVHLSPD SRVLEIGCGT LRVGLHFIRY
101: LNPEHYHCLE RDELSLMAAF RYELPSQGLL YKRPLIVRGE DMDFSRFGSG VVYDLIYASA VFLHMPDKLV WVGLERLANK LKPYEGRIFV SHNIKFCSRL
201: GGEECTKRLT SLGLEYVAKH THDSLLFNHY EIWFEFRRSK A

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.