Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53229 | Canola | cytosol | 40.26 | 62.0 |
| VIT_14s0030g01370.t01 | Wine grape | mitochondrion | 77.92 | 24.9 |
| Bra009981.1-P | Field mustard | plastid | 100.0 | 23.48 |
| CDX80677 | Canola | plastid | 98.7 | 23.1 |
| CDY41933 | Canola | endoplasmic reticulum, golgi, vacuole | 80.52 | 19.56 |
| CDX74152 | Canola | plastid | 81.82 | 19.15 |
| CDY27798 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 80.52 | 19.02 |
| CDY40697 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 80.52 | 18.9 |
| KRH65337 | Soybean | golgi | 81.82 | 18.16 |
| KRH76204 | Soybean | mitochondrion | 81.82 | 18.16 |
| Solyc01g098040.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 75.32 | 17.85 |
| PGSC0003DMT400057857 | Potato | endoplasmic reticulum, golgi | 74.03 | 17.54 |
| HORVU2Hr1G020730.4 | Barley | plastid | 62.34 | 16.44 |
| Os07t0667400-01 | Rice | endoplasmic reticulum, golgi | 71.43 | 16.27 |
| GSMUA_Achr5P11510_001 | Banana | endoplasmic reticulum, golgi | 70.13 | 16.22 |
| KXG36887 | Sorghum | endoplasmic reticulum, golgi | 72.73 | 16.09 |
| Zm00001d007108_P001 | Maize | plasma membrane | 71.43 | 15.85 |
| GSMUA_Achr1P02350_001 | Banana | endoplasmic reticulum, golgi | 68.83 | 15.19 |
| TraesCS2A01G119500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.23 | 15.0 |
| TraesCS2B01G140200.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 62.34 | 14.2 |
| TraesCS2D01G121300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus, plastid | 64.94 | 12.35 |
| CDX86182 | Canola | plastid | 6.49 | 2.26 |
Protein Annotations
| EnsemblPlants:CDX86183 | EnsemblPlantsGene:GSBRNA2T00144252001 | PANTHER:PTHR37886 | ProteinID:CDX86183 | ProteinID:CDX86183.1 | UniParc:UPI0004EDDC1D |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA06g29000D
Coordinates
chrLK031845:+:217108..217491
Molecular Weight (calculated)
8986.9 Da
IEP (calculated)
8.756
GRAVY (calculated)
-0.382
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MPDELVWTGV ERLVDKLKPY EGRMFVSHNI KFCTRLGGEK CTERLASLGL ESLGKQTHDS LLFNHYEIWF GFRRIKG
001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.