CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, golgi, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001137.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	94.22	96.57
CDY40697	Canola	endoplasmic reticulum, golgi, plastid, vacuole	96.05	96.34
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	91.79	92.64
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	89.06	92.43
AT3G05100.1	Thale cress	plastid	86.63	84.82
VIT_14s0030g01370.t01	Wine grape	mitochondrion	60.79	82.99
CDX86183	Canola	cytosol	19.15	81.82
CDX80677	Canola	plastid	81.46	81.46
CDY53229	Canola	cytosol	12.16	80.0
CDX86182	Canola	plastid	50.76	75.57
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	72.95	73.85
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	72.34	73.23
KRH76204	Soybean	mitochondrion	72.04	68.3
KRH65337	Soybean	golgi	71.73	68.01
HORVU2Hr1G020730.4	Barley	plastid	57.75	65.07
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	63.53	62.76
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	62.61	60.95
Zm00001d007108_P001	Maize	plasma membrane	63.83	60.52
KXG36887	Sorghum	endoplasmic reticulum, golgi	63.83	60.34
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	62.01	60.0
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	63.53	59.89
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	61.09	59.47
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	61.7	50.12

Protein Annotations

EnsemblPlants:CDX74152	EnsemblPlantsGene:GSBRNA2T00111913001	Gene3D:3.40.50.150	InterPro:SAM-dependent_MTases	PANTHER:PTHR37886	ProteinID:CDX74152
ProteinID:CDX74152.1	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0004EDB0B4	MapMan:35.2

Description

BnaA03g28950D

Coordinates

chrLK031800:-:1577896..1579723

Molecular Weight (calculated)

36924.3 Da

IEP (calculated)

7.864

GRAVY (calculated)

-0.208

Length

329 amino acids

Sequence
(BLAST)

001: MAFLSSSSPT MQKGIFVSVP VLVLSVSFAA AVFFLLSSSL SSSSCSCPSS ISSPNVGSVS DVRLEERIST TREDIEWVRD LIRSNGLHMQ KNELRKGINP
101: RTRDQQLADL KQYKGISHYE GEEANNHTAL PCPGELLVEQ HHSNYGEPWA GGRDVFEFLA ESSNLKPNSR VLEIGCGTLR VGLHFIRYLN PSHFHCLEKD
201: ELSLMAALRY ELPSQGLLHK RPLILRGDDM EFSKFGSGVS YDLIYASAVF LHMPDKLVWA GLERLVGKLK PYEGRIFVSH NVKFCSRLGG DECGKRLASL
301: GLEYLGKQTH DSLLFNHYEI WFGFRRLKP

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.