Factsheet for Bra001137.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74152	Canola	plastid	96.57	94.22
Bra039463.1-P	Field mustard	endoplasmic reticulum, golgi, plastid, vacuole	92.83	90.3
AT3G05100.1	Thale cress	plastid	88.16	84.23
VIT_14s0030g01370.t01	Wine grape	mitochondrion	61.99	82.57
Bra009981.1-P	Field mustard	plastid	80.37	78.66
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	75.7	74.77
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	75.08	74.15
KRH65337	Soybean	golgi	73.21	67.72
KRH76204	Soybean	mitochondrion	73.21	67.72
HORVU2Hr1G020730.4	Barley	plastid	59.19	65.07
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	65.11	62.76
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	63.24	60.06
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	64.8	59.6
Zm00001d007108_P001	Maize	plasma membrane	63.86	59.08
KXG36887	Sorghum	endoplasmic reticulum, golgi	63.86	58.91
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	61.68	58.58
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	61.68	58.24
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	61.99	49.14

Protein Annotations

EnsemblPlants:Bra001137.1	EnsemblPlants:Bra001137.1-P	EnsemblPlantsGene:Bra001137	Gene3D:3.40.50.150	InterPro:SAM-dependent_MTases	PANTHER:PTHR37886
PFscan:PS51257	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI00025409CC	UniProt:M4CAA8
MapMan:35.2	:	:	:	:	:

Description

AT3G05100 (E=4e-145) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); Has 53 Blast hits to 53 proteins in 21 species: Archae - 2; Bacteria - 27; Metazoa - 0; Fungi - 3; Plants - 11; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

Coordinates

chrA03:+:14924374..14926073

Molecular Weight (calculated)

36157.4 Da

IEP (calculated)

7.613

GRAVY (calculated)

-0.228

Length

321 amino acids

Sequence
(BLAST)

001: MQKGIFVSVP VLVLSVSFAA AVFFLLSSSL SSSSCSCPPS LSSSNVVGGS VSDVRLEERI STTREDIEWV RDLIRSNGLH MQKNELRKGI NPRTRDQQLA
101: DLKQYKGISH YEGEEANNHT ALPCPGELLV EQHHSNYGEP WAGGRDVFEF LAESSNLKPN SRVLEIGCGT LRVGLHFIRY LNPSHFHCLE KDELSLMAAL
201: RYELPSQGLL HKRPLILRGE DMEFSKFGSG VSYDLIYASA VFLHMPDKLV WAGLERLVEK LKPYEGRIFV SHNVKFCSRL GGDECGKKLA SLGLEYLGKQ
301: THDSLLFNHY EIWFGFRRLR P

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.