Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH65337 | Soybean | golgi | 95.68 | 95.68 |
| VIT_14s0030g01370.t01 | Wine grape | mitochondrion | 60.52 | 87.14 |
| CDX86183 | Canola | cytosol | 18.16 | 81.82 |
| Solyc01g098040.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 70.32 | 75.08 |
| PGSC0003DMT400057857 | Potato | endoplasmic reticulum, golgi | 70.03 | 74.77 |
| CDY53229 | Canola | cytosol | 10.66 | 74.0 |
| Bra001137.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 67.72 | 73.21 |
| CDY40697 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 68.88 | 72.87 |
| CDY41933 | Canola | endoplasmic reticulum, golgi, vacuole | 66.28 | 72.56 |
| CDY27798 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 68.01 | 72.39 |
| CDX74152 | Canola | plastid | 68.3 | 72.04 |
| Bra009981.1-P | Field mustard | plastid | 68.01 | 71.95 |
| Bra039463.1-P | Field mustard | endoplasmic reticulum, golgi, plastid, vacuole | 68.01 | 71.52 |
| CDX80677 | Canola | plastid | 67.44 | 71.12 |
| AT3G05100.1 | Thale cress | plastid | 66.28 | 68.45 |
| CDX86182 | Canola | plastid | 40.92 | 64.25 |
| HORVU2Hr1G020730.4 | Barley | plastid | 53.6 | 63.7 |
| Os07t0667400-01 | Rice | endoplasmic reticulum, golgi | 61.38 | 63.02 |
| GSMUA_Achr5P11510_001 | Banana | endoplasmic reticulum, golgi | 60.23 | 62.76 |
| KXG36887 | Sorghum | endoplasmic reticulum, golgi | 61.38 | 61.21 |
| Zm00001d007108_P001 | Maize | plasma membrane | 61.1 | 61.1 |
| GSMUA_Achr1P02350_001 | Banana | endoplasmic reticulum, golgi | 59.94 | 59.6 |
| TraesCS2A01G119500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 57.93 | 59.12 |
| TraesCS2B01G140200.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 56.77 | 58.28 |
| TraesCS2D01G121300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus, plastid | 57.64 | 49.38 |
Protein Annotations
| EMBL:ACUP02000582 | EnsemblPlants:KRH76204 | EnsemblPlantsGene:GLYMA_01G139000 | EntrezGene:100787144 | Gene3D:3.40.50.150 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:SAM-dependent_MTases | PANTHER:PTHR37886 | ProteinID:KRH76203.1 | ProteinID:KRH76204 |
| ProteinID:KRH76204.1 | SEG:seg | SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI00023376E5 | UniProt:I1J7U5 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:46672805..46675995
Molecular Weight (calculated)
38776.4 Da
IEP (calculated)
7.024
GRAVY (calculated)
-0.175
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSASRAMS KGVVVSVPVL VLSALVATVF LFFLLSSLSS CSCPTPSEIS ASNVRSVGVG IGVPESSSGN VPLATRKESS SSNIPLSTRK EDVEWVKNQI
101: QANGLHMHDN VLRKGINPRT RAQQLEDLRQ FKGISHYEGP DSDNHTALPC PGELLVEEHH SNYGEPWAGG RDVFEFLAEA SQLRSDSQVL EIGCGTLRVG
201: LHFIRYLNPE HFHCLERDEL SLMAVFRYEL PAQGLLYKRP SIVKGDDMDF SRFDSGIMYD LIYASAVFLH MPDKLVWTGL ERLASKLKPY DGRIFVSHNI
301: KFCSRLGGEE CTKRLASLGL EYLGKHTHDS LLFNHYEIWF EFRRSKA
101: QANGLHMHDN VLRKGINPRT RAQQLEDLRQ FKGISHYEGP DSDNHTALPC PGELLVEEHH SNYGEPWAGG RDVFEFLAEA SQLRSDSQVL EIGCGTLRVG
201: LHFIRYLNPE HFHCLERDEL SLMAVFRYEL PAQGLLYKRP SIVKGDDMDF SRFDSGIMYD LIYASAVFLH MPDKLVWTGL ERLASKLKPY DGRIFVSHNI
301: KFCSRLGGEE CTKRLASLGL EYLGKHTHDS LLFNHYEIWF EFRRSKA
001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.