CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, vacuole

Predictor Summary:

plastid 4
endoplasmic reticulum 3
extracellular 2
vacuole 3
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74152	Canola	plastid	96.34	96.05
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	90.24	93.38
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	92.38	92.94
AT3G05100.1	Thale cress	plastid	87.8	85.71
VIT_14s0030g01370.t01	Wine grape	mitochondrion	60.67	82.57
CDY53229	Canola	cytosol	12.5	82.0
CDX86183	Canola	cytosol	18.9	80.52
CDX80677	Canola	plastid	80.49	80.24
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	73.78	74.46
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	73.17	73.85
CDX86182	Canola	plastid	49.7	73.76
KRH76204	Soybean	mitochondrion	72.87	68.88
KRH65337	Soybean	golgi	72.56	68.59
HORVU2Hr1G020730.4	Barley	plastid	57.93	65.07
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	63.41	62.46
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	62.2	60.35
Zm00001d007108_P001	Maize	plasma membrane	63.41	59.94
KXG36887	Sorghum	endoplasmic reticulum, golgi	63.41	59.77
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	62.8	59.03
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	60.98	58.82
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	60.37	58.58
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	61.59	49.88

Protein Annotations

EnsemblPlants:CDY40697	EnsemblPlantsGene:GSBRNA2T00071582001	Gene3D:3.40.50.150	InterPro:SAM-dependent_MTases	PANTHER:PTHR37886	ProteinID:CDY40697
ProteinID:CDY40697.1	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0004EF27BB	UniProt:A0A078HS78
MapMan:35.2	:	:	:	:	:

Description

BnaC03g34130DBnaC03g34130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS78]

Coordinates

chrLK032477:+:192490..194053

Molecular Weight (calculated)

36877.3 Da

IEP (calculated)

7.613

GRAVY (calculated)

-0.193

Length

328 amino acids

Sequence
(BLAST)

001: MAFLSSSSPT MQKGVFVSVP VLVLSVSFAA AVFFLLSSSL SCSCPPSLSS SNVVGGSVSD VRLEERISTT REDIEWVRDL IRSNGLHMQK NELRKGINPR
101: TRDQQLADLK QYKGISHYEG EEANNHTALP CPGELLVEQH HSNYGEPWAG GRDVFEFLAE SSNLKPNSRV LEIGCGTLRV GLHFIRYLNP SHFHCLEKDE
201: LSLMAALRYE LPSQGLLHKR PLILRGDDME FSKFGSGVTY DLIYASAVFL HMPDKLVWAG LERLVEKLKP YEGRIFVSHN VKFCSRLGGD ECAKKLASLG
301: LEYLGKQTHD SLLFNHYEIW FGFRRLKP

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.