Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039463.1-P | Field mustard | endoplasmic reticulum, golgi, plastid, vacuole | 97.55 | 96.36 |
| CDY41933 | Canola | endoplasmic reticulum, golgi, vacuole | 92.94 | 95.58 |
| CDY40697 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 92.94 | 92.38 |
| CDX74152 | Canola | plastid | 92.64 | 91.79 |
| AT3G05100.1 | Thale cress | plastid | 87.12 | 84.52 |
| CDY53229 | Canola | cytosol | 12.58 | 82.0 |
| VIT_14s0030g01370.t01 | Wine grape | mitochondrion | 59.82 | 80.91 |
| CDX86183 | Canola | cytosol | 19.02 | 80.52 |
| CDX80677 | Canola | plastid | 80.06 | 79.33 |
| CDX86182 | Canola | plastid | 49.08 | 72.4 |
| Solyc01g098040.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 70.86 | 71.08 |
| PGSC0003DMT400057857 | Potato | endoplasmic reticulum, golgi | 70.25 | 70.46 |
| KRH76204 | Soybean | mitochondrion | 72.39 | 68.01 |
| KRH65337 | Soybean | golgi | 72.09 | 67.72 |
| HORVU2Hr1G020730.4 | Barley | plastid | 57.06 | 63.7 |
| GSMUA_Achr5P11510_001 | Banana | endoplasmic reticulum, golgi | 62.58 | 61.26 |
| Os07t0667400-01 | Rice | endoplasmic reticulum, golgi | 61.96 | 59.76 |
| KXG36887 | Sorghum | endoplasmic reticulum, golgi | 63.5 | 59.48 |
| Zm00001d007108_P001 | Maize | plasma membrane | 63.19 | 59.37 |
| TraesCS2A01G119500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 61.35 | 58.82 |
| TraesCS2B01G140200.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 60.74 | 58.58 |
| GSMUA_Achr1P02350_001 | Banana | endoplasmic reticulum, golgi | 62.58 | 58.45 |
| TraesCS2D01G121300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus, plastid | 61.04 | 49.14 |
Protein Annotations
| EnsemblPlants:CDY27798 | EnsemblPlantsGene:GSBRNA2T00038604001 | Gene3D:3.40.50.150 | InterPro:SAM-dependent_MTases | PANTHER:PTHR37886 | ProteinID:CDY27798 |
| ProteinID:CDY27798.1 | SEG:seg | SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI0004EE1190 | UniProt:A0A078GT61 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA05g32070DBnaA05g32070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT61]
Coordinates
chrLK032209:-:490894..493165
Molecular Weight (calculated)
36733.2 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.171
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLSSSSPT MQKGIFVSVP VLVLSVSFAA AVIFLLTSSL STCSCPSSVS SPNDVVGSVS DVRLEEKIST TREDVEWVRD LIRSNGLHMQ KNELRKGINP
101: RTRDQQLADL IQYKGISHYE GDNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAQSS NLKPNSRVLE IGCGTLRVGL HFIRYLNPTH FHCLEKDELS
201: LMAALRYELP SQGLLHKRPL ILRGDDMEFS KFGLDTAYDL IYASAVFLHM PDKLVWTGLE RLVEKLKPYD GRIFVSHNVK FCSRLGGDEC AKKLASLGLE
301: YLGKQTHDSL LFNHYEIWFG FRRVKQ
101: RTRDQQLADL IQYKGISHYE GDNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAQSS NLKPNSRVLE IGCGTLRVGL HFIRYLNPTH FHCLEKDELS
201: LMAALRYELP SQGLLHKRPL ILRGDDMEFS KFGLDTAYDL IYASAVFLHM PDKLVWTGLE RLVEKLKPYD GRIFVSHNVK FCSRLGGDEC AKKLASLGLE
301: YLGKQTHDSL LFNHYEIWFG FRRVKQ
001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.