Factsheet for TraesCS2D01G121300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus, cytosol

Predictor Summary:

endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus, plastid
Any Predictor:	cytosol, endoplasmic reticulum, nucleus, plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	80.74	96.18
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	77.53	92.9
HORVU2Hr1G020730.4	Barley	plastid	63.21	87.67
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	69.63	83.43
Zm00001d007108_P001	Maize	plasma membrane	68.4	79.83
KXG36887	Sorghum	endoplasmic reticulum, golgi	68.4	79.6
VIT_14s0030g01370.t01	Wine grape	mitochondrion	43.95	73.86
CDX86183	Canola	cytosol	12.35	64.94
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	53.09	64.56
CDY53229	Canola	cytosol	7.9	64.0
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	54.57	63.32
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	49.88	62.15
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	49.88	62.15
Bra001137.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	49.14	61.99
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	48.4	61.83
CDX74152	Canola	plastid	50.12	61.7
CDY40697	Canola	endoplasmic reticulum, golgi, plastid, vacuole	49.88	61.59
CDX80677	Canola	plastid	49.88	61.4
Bra009981.1-P	Field mustard	plastid	49.63	61.28
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	49.14	61.04
Bra039463.1-P	Field mustard	endoplasmic reticulum, golgi, plastid, vacuole	49.63	60.91
AT3G05100.1	Thale cress	plastid	48.15	58.04
KRH76204	Soybean	mitochondrion	49.38	57.64
KRH65337	Soybean	golgi	49.14	57.35
CDX86182	Canola	plastid	29.88	54.75

Protein Annotations

EnsemblPlants:TraesCS2D01G121300.1	EnsemblPlantsGene:TraesCS2D01G121300	Gene3D:3.40.50.150	InterPro:SAM-dependent_MTases	PANTHER:PTHR37886	SEG:seg
SUPFAM:SSF53335	TIGR:cd02440	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2D:+:70522129..70523538

Molecular Weight (calculated)

44569.1 Da

IEP (calculated)

7.699

GRAVY (calculated)

-0.276

Length

405 amino acids

Sequence
(BLAST)

001: MGPCASSDAV EPGQVAGRPP SHRTRHGRDE IPSRPTDRPT HALHRQQHAP PSPPHHPRST PRRSMALPSA SGGGSTARLL TVPALLLLLS CAALLVFLLL
101: PSPSASSGAH LCACSDPVTT HTTTSVTTTT TTTAAPAPIA TSPDDVAWLK AQLASNSLAL LASADAWHEL RKGINPRTRE RQLFDLNRHH GISHYPEEEA
201: TNHTALPCPG ELLVEEHHSN YGEPWAGGRD VFEFLANASA LAPRDQVLEI GCGTLRVGLH FIRFLDAGRF HCLEQDELSL MAALRYELPS QGLLYKRPMI
301: VRGGDMDFSK FGDTVLYDLI YSSAAFLHIP RDLVWAGLER LAGKLRPQTG RIFVSHNIKF CTRLGGDECT RRLTELGLEY VGKHTHDSLL FNHYEIWFEF
401: RRPKV

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.