Factsheet for GSMUA_Achr1P02350_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	83.67	87.69
VIT_14s0030g01370.t01	Wine grape	mitochondrion	54.15	78.42
HORVU2Hr1G020730.4	Barley	plastid	58.17	69.52
CDX86183	Canola	cytosol	15.19	68.83
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	65.04	67.16
Zm00001d007108_P001	Maize	plasma membrane	64.76	65.13
Bra001137.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	59.6	64.8
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	62.46	64.5
KXG36887	Sorghum	endoplasmic reticulum, golgi	64.18	64.37
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	58.17	64.04
CDY53229	Canola	cytosol	9.17	64.0
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	62.18	63.82
CDX74152	Canola	plastid	59.89	63.53
Bra009981.1-P	Field mustard	plastid	59.31	63.11
CDX80677	Canola	plastid	59.31	62.92
CDY40697	Canola	endoplasmic reticulum, golgi, plastid, vacuole	59.03	62.8
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	58.45	62.58
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	58.17	62.46
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	57.88	62.15
Bra039463.1-P	Field mustard	endoplasmic reticulum, golgi, plastid, vacuole	58.74	62.12
AT3G05100.1	Thale cress	plastid	59.6	61.9
KRH65337	Soybean	golgi	59.89	60.23
KRH76204	Soybean	mitochondrion	59.6	59.94
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	63.32	54.57
CDX86182	Canola	plastid	34.1	53.85

Protein Annotations

EnsemblPlants:GSMUA_Achr1P02350_001	EnsemblPlants:GSMUA_Achr1T02350_001	EnsemblPlantsGene:GSMUA_Achr1G02350_001	Gene3D:3.40.50.150	InterPro:SAM-dependent_MTases	PANTHER:PTHR37886
SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0002962803	UniProt:M0RWE3	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G02350_001]

Coordinates

chr1:+:1902232..1904415

Molecular Weight (calculated)

38600.2 Da

IEP (calculated)

6.875

GRAVY (calculated)

-0.099

Length

349 amino acids

Sequence
(BLAST)

001: MATPPSKGIT VPASLLILTA AAAFLLFLLL PSLSPSSSNA PSLSCPTTAA AVAATTRPPD PISPTPDDIA WLKSQLARNS IQEPPSSPAA WHSLRKGINP
101: RTRAQQLEDL RRFKGVSHYE GDDAGNHTAL PCPGELLVEE HHSNYGEPWA GGRDVFEFLA AAAWLAPADH VLEIGCGTLR VGLHFIRYLD AARFHCLERD
201: ELSLMAALRY ELPSQGLLHK RPLILRGEDM EFDRFGSDVV YDLIYASAVF LHMPDALVWE GLERLSGRLK PEKGRIFVSH NIKFCSRLGG DVCTERLSKL
301: GLEYVRKHTH DSLLFSHYEI WFEFRKMAYS ANCRLSILEG NCSTANVIS

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.