Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41933 | Canola | endoplasmic reticulum, golgi, vacuole | 83.93 | 88.96 |
| Bra001137.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 84.23 | 88.16 |
| CDY40697 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 85.71 | 87.8 |
| CDY27798 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 84.52 | 87.12 |
| Bra039463.1-P | Field mustard | endoplasmic reticulum, golgi, plastid, vacuole | 85.42 | 86.97 |
| CDX74152 | Canola | plastid | 84.82 | 86.63 |
| VIT_14s0030g01370.t01 | Wine grape | mitochondrion | 57.44 | 80.08 |
| CDY53229 | Canola | cytosol | 10.71 | 72.0 |
| Solyc01g098040.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 69.35 | 71.69 |
| PGSC0003DMT400057857 | Potato | endoplasmic reticulum, golgi | 69.05 | 71.38 |
| KRH76204 | Soybean | mitochondrion | 68.45 | 66.28 |
| KRH65337 | Soybean | golgi | 68.15 | 65.99 |
| HORVU2Hr1G020730.4 | Barley | plastid | 55.36 | 63.7 |
| GSMUA_Achr5P11510_001 | Banana | endoplasmic reticulum, golgi | 62.5 | 63.06 |
| GSMUA_Achr1P02350_001 | Banana | endoplasmic reticulum, golgi | 61.9 | 59.6 |
| Os07t0667400-01 | Rice | endoplasmic reticulum, golgi | 58.63 | 58.28 |
| TraesCS2B01G140200.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 57.74 | 57.4 |
| Zm00001d007108_P001 | Maize | plasma membrane | 59.23 | 57.35 |
| KXG36887 | Sorghum | endoplasmic reticulum, golgi | 59.23 | 57.18 |
| TraesCS2A01G119500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 57.74 | 57.06 |
| TraesCS2D01G121300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus, plastid | 58.04 | 48.15 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.2 | EntrezGene:819672 | UniProt:A0A178V9R8 | ProteinID:AAF27016.1 | ProteinID:AEE74186.1 |
| ArrayExpress:AT3G05100 | EnsemblPlantsGene:AT3G05100 | RefSeq:AT3G05100 | TAIR:AT3G05100 | RefSeq:AT3G05100-TAIR-G | EnsemblPlants:AT3G05100.1 |
| TAIR:AT3G05100.1 | EMBL:AY070370 | EMBL:AY091328 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | RefSeq:NP_187161.1 |
| ProteinID:OAP02175.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR37886 | UniProt:Q9MAA9 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| TMHMM:TMhelix | UniParc:UPI00000A1151 | SEG:seg | : | : | : |
Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
Coordinates
chr3:+:1424057..1426563
Molecular Weight (calculated)
37720.9 Da
IEP (calculated)
6.698
GRAVY (calculated)
-0.232
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.