CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
extracellular 4
golgi 6
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76204	Soybean	mitochondrion	95.68	95.68
VIT_14s0030g01370.t01	Wine grape	mitochondrion	60.23	86.72
CDX86183	Canola	cytosol	18.16	81.82
CDY53229	Canola	cytosol	10.66	74.0
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	69.16	73.85
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	68.88	73.54
Bra001137.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	67.72	73.21
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	66.57	72.87
CDY40697	Canola	endoplasmic reticulum, golgi, plastid, vacuole	68.59	72.56
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	67.72	72.09
CDX74152	Canola	plastid	68.01	71.73
Bra009981.1-P	Field mustard	plastid	67.44	71.34
Bra039463.1-P	Field mustard	endoplasmic reticulum, golgi, plastid, vacuole	67.72	71.21
CDX80677	Canola	plastid	66.86	70.52
AT3G05100.1	Thale cress	plastid	65.99	68.15
HORVU2Hr1G020730.4	Barley	plastid	53.6	63.7
CDX86182	Canola	plastid	40.35	63.35
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	61.67	63.31
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	60.52	63.06
KXG36887	Sorghum	endoplasmic reticulum, golgi	61.38	61.21
Zm00001d007108_P001	Maize	plasma membrane	61.1	61.1
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	60.23	59.89
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	57.64	58.82
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	57.06	58.58
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	57.35	49.14

Protein Annotations

EntrezGene:100798127	Gene3D:3.40.50.150	MapMan:35.2	EMBL:ACUP02001331	EMBL:BT096939	UniProt:C6TH26
EnsemblPlantsGene:GLYMA_03G028300	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlants:KRH65337	ProteinID:KRH65337
ProteinID:KRH65337.1	ProteinID:KRH65338.1	ProteinID:KRH65339.1	PANTHER:PTHR37886	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TMHMM:TMhelix	UniParc:UPI0001B16E03	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:3103251..3106226

Molecular Weight (calculated)

38852.5 Da

IEP (calculated)

6.987

GRAVY (calculated)

-0.167

Length

347 amino acids

Sequence
(BLAST)

001: MALLASRAMS KGVVVSVPVL VLSALVATVF LFFLLSSLSS CSCPTPSEIS ASNARSVGVG IGVSESSSSN VPVATTKESS SGYIPLSTRK EDVEWVKDQI
101: RANGLQMHDN VLRKGINPRT RAQQLEDFRR FKGISHYEGP DSDNHTSLPC PGELLVEEHH SNYGEPWAGG RDVFEFLAEA SQLRPDSQVL EIGCGTLRVG
201: LHFIRYLNPE HFHCLERDEL SLMAVFRYEL PAQGLLYKRP SIVKGDDMDF SRFDSGIMYD LIYASAVFLH MPDKLVWTGL ERLASKLKPY DGRIFVSHNI
301: KFCSRLGGEE CTKRLASLGL EYLGKHTHDS LLFNHYEIWF EFRRSKA

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.