Factsheet for PGSC0003DMT400057857

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	98.15	98.15
VIT_14s0030g01370.t01	Wine grape	mitochondrion	64.31	86.72
Bra001137.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	74.15	75.08
CDX86183	Canola	cytosol	17.54	74.03
CDY40697	Canola	endoplasmic reticulum, golgi, plastid, vacuole	73.85	73.17
Bra009981.1-P	Field mustard	plastid	73.54	72.87
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	70.77	72.56
CDX74152	Canola	plastid	73.23	72.34
CDX80677	Canola	plastid	72.62	71.73
Bra039463.1-P	Field mustard	endoplasmic reticulum, golgi, plastid, vacuole	71.38	70.3
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	70.46	70.25
KRH76204	Soybean	mitochondrion	74.77	70.03
AT3G05100.1	Thale cress	plastid	71.38	69.05
KRH65337	Soybean	golgi	73.54	68.88
CDY53229	Canola	cytosol	10.46	68.0
HORVU2Hr1G020730.4	Barley	plastid	59.69	66.44
CDX86182	Canola	plastid	44.31	65.16
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	64.62	62.13
GSMUA_Achr5P11510_001	Banana	endoplasmic reticulum, golgi	63.08	61.56
KXG36887	Sorghum	endoplasmic reticulum, golgi	65.54	61.21
Zm00001d007108_P001	Maize	plasma membrane	64.62	60.52
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	62.46	60.06
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	61.85	59.12
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	62.15	57.88
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	62.15	49.88

Protein Annotations

EnsemblPlants:PGSC0003DMT400057857	EnsemblPlantsGene:PGSC0003DMG400022466	EntrezGene:102605746	Gene3D:3.40.50.150	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:SAM-dependent_MTases	PANTHER:PTHR37886	PGSC:PGSC0003DMG400022466	RefSeq:XP_006347817.1	SEG:seg
SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI00029605B4	UniProt:M1C1S8	MapMan:35.2	:

Description

S-adenosylmethionine-dependent methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400022466]

Coordinates

chr1:-:75661708..75664683

Molecular Weight (calculated)

36334.7 Da

IEP (calculated)

7.194

GRAVY (calculated)

-0.148

Length

325 amino acids

Sequence
(BLAST)

001: MALLSSSSKG VVVSLPVLLL TGAAFSAVLF FFLFSSPPPC NCPVPPTTAV GGGGGYRSGT GERISTSTED IEWVKKQIEG NGLHMADNVL RKGINPRTRQ
101: QQLQDLLQFK GISHYEGEPT NNHTALPCPG ELLVEQHHSN YGEPWAGGRD VFEFLAESAH LTPNAQVLEI GCGTLRVGLH FIRYLNPEHF HCLERDELSL
201: MAAFRYELPS QGLLHKRPLI VRGEDMDFSK FGSGTMYDLI YASAVFLHIP DKLVWVGLER LAAKLKPQEG RIFVSHNIKF CSRLGGEECT KRLNDLGIEY
301: IGKFTHDSLL FNHYEIWFGF RRFRA

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.