Factsheet for GSMUA_Achr5P11510_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P02350_001	Banana	endoplasmic reticulum, golgi	87.69	83.67
VIT_14s0030g01370.t01	Wine grape	mitochondrion	56.46	78.01
CDX86183	Canola	cytosol	16.22	70.13
HORVU2Hr1G020730.4	Barley	plastid	59.76	68.15
Os07t0667400-01	Rice	endoplasmic reticulum, golgi	66.67	65.68
Bra001137.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	62.76	65.11
CDY41933	Canola	endoplasmic reticulum, golgi, vacuole	60.96	64.04
CDX74152	Canola	plastid	62.76	63.53
CDY40697	Canola	endoplasmic reticulum, golgi, plastid, vacuole	62.46	63.41
Solyc01g098040.2.1	Tomato	endoplasmic reticulum, plasma membrane	61.86	63.38
TraesCS2B01G140200.1	Wheat	endoplasmic reticulum, golgi, vacuole	64.26	63.31
CDX80677	Canola	plastid	62.46	63.22
Bra009981.1-P	Field mustard	plastid	62.16	63.11
PGSC0003DMT400057857	Potato	endoplasmic reticulum, golgi	61.56	63.08
Zm00001d007108_P001	Maize	plasma membrane	65.47	62.82
KXG36887	Sorghum	endoplasmic reticulum, golgi	65.47	62.64
CDY27798	Canola	endoplasmic reticulum, golgi, plastid, vacuole	61.26	62.58
AT3G05100.1	Thale cress	plastid	63.06	62.5
Bra039463.1-P	Field mustard	endoplasmic reticulum, golgi, plastid, vacuole	61.56	62.12
TraesCS2A01G119500.1	Wheat	endoplasmic reticulum, golgi, vacuole	63.36	62.06
KRH65337	Soybean	golgi	63.06	60.52
KRH76204	Soybean	mitochondrion	62.76	60.23
CDY53229	Canola	cytosol	9.01	60.0
CDX86182	Canola	plastid	36.04	54.3
TraesCS2D01G121300.1	Wheat	cytosol, endoplasmic reticulum, nucleus, plastid	64.56	53.09

Protein Annotations

EnsemblPlants:GSMUA_Achr5P11510_001	EnsemblPlants:GSMUA_Achr5T11510_001	EnsemblPlantsGene:GSMUA_Achr5G11510_001	Gene3D:3.40.50.150	InterPro:SAM-dependent_MTases	PANTHER:PTHR37886
SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0002957E9E	UniProt:M0SXN0	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G11510_001]

Coordinates

chr5:-:8240621..8242013

Molecular Weight (calculated)

36834.2 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.052

Length

333 amino acids

Sequence
(BLAST)

001: MATLPSKGIT VPASLLLLTA AAALLLFLLL SSLSPAPSSS SAASFSCPTT SAASSIAAAT GPPDPISPTL DDIAWLKSQL VLNSIQEPPS SPAAWHSLRK
101: GINPRTRDQQ LEDLRRFKGV SHYKGDDAEN HTALPCPEEL LVEEHHSNYG EPWAGGRDVF EFLATAASLS PADHVLEIGC GTLRVGLHFI RYLDPARFHC
201: LERDELSLMA ALRYEIPSQG LLHKRPLILR GEDMEFDRFG SDVLYDLIYA SAVFLHMPDA LVWVGMERLS ARLKLEKGRI FVSHNIKFCS RLGGDVCTNR
301: LTNLGLEYVG KRTHDSLLFN HYEIWFEFRK LKA

Best Arabidopsis Sequence Match ( AT3G05100.1 )
(BLAST)

001: MAFSSSSSSP AMQKGIFVSM PVLVLTVSFV AAVFFLLSSS FSSCSCPEAL SSSPTDAVEA SVGGSGGDVR FEDRISPTQD DIEWVRDLIR SNGLHMQKNE
101: LRKGINPRTR DQQLADLIQY KGISHYEGDE ANNHTALPCP GELLVEQHHS NYGEPWAGGR DVFEFLAESS SLKPNSRVLE IGCGTLRVGL HFIRYLSPQH
201: FHCLEKDELS LMAALRYELP SQGLLHKRPL IVRGDDMEFS KFGSDTAYDL IYASAVFLHM PDKLVWTGLE RLVDRLKPYD GRIFVSHNVK FCSRLGQDKC
301: SQKLASLGLE YLGKQTHDSL LFNHYEIWFG FRRFKT

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.