Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76583 | Canola | plastid | 97.69 | 97.69 |
| CDY69842 | Canola | vacuole | 98.46 | 82.05 |
| Bra040103.1-P | Field mustard | plastid | 66.92 | 64.44 |
| AT4G16980.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 75.38 | 59.76 |
Protein Annotations
Description
No Description!
Coordinates
chrA08:+:10036981..10037373
Molecular Weight (calculated)
13237.9 Da
IEP (calculated)
3.884
GRAVY (calculated)
0.099
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAPSGSMSM PPMPSGGSPM PMMTPPPMPM MAPPPMAMAP PPMPMTPPPM PMAPMPMAPS SSPMSPPTTM APSPETVPDM ASPPMMPGMD SSPSPGPMPP
101: AMASPDSGAF NVRNDVVAIS FLVAAHLLLV
101: AMASPDSGAF NVRNDVVAIS FLVAAHLLLV
001: MASSFSSQAF FLLTLSMVLI PFSLAQAPMM APSGSMSMPP MSSGGGSSVP PPVMSPMPMM TPPPMPMTPP PMPMTPPPMP MAPPPMPMAS PPMMPMTPST
101: SPSPLTVPDM PSPPMPSGME SSPSPGPMPP AMAASPDSGA FNVRNNVVTL SCVVGVVAAH FLLV
101: SPSPLTVPDM PSPPMPSGME SSPSPGPMPP AMAASPDSGA FNVRNNVVTL SCVVGVVAAH FLLV
Arabidopsis Description
Arabinogalactan family protein [Source:UniProtKB/TrEMBL;Acc:Q9FT76]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.