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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 2
  • golgi 2
  • plastid 3
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:secretory
TargetP:plastid
WoLF PSORT:nucleus
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021074.1-P Field mustard plastid 97.69 97.69
CDY69842 Canola vacuole 99.23 82.69
CDY42949 Canola vacuole 81.54 74.13
CDY09660 Canola vacuole 90.0 68.82
CDX90494 Canola endoplasmic reticulum, extracellular, vacuole 90.77 64.13
AT4G16980.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 76.92 60.98
Protein Annotations
EnsemblPlants:CDX76583EnsemblPlantsGene:GSBRNA2T00127028001ProteinID:CDX76583ProteinID:CDX76583.1SEG:segUniParc:UPI0004EE1F63
MapMan:35.2:::::
Description
BnaA08g08170D
Coordinates
chrLK031807:-:2293348..2293740
Molecular Weight (calculated)
13311.9 Da
IEP (calculated)
3.917
GRAVY (calculated)
0.061
Length
130 amino acids
Sequence
(BLAST)
001: MMAPSGSMSM PPMPSGGSPM PMMTPPPMPM MTPPPMAMAP PPMPMTPPPM PMAPMPMTPS SSPMSPPTTM APSPETVPDM ASPPMMPGME SSPSPGPMPP
101: AMASPDSGAF NVRNDVVAIS FLVAAHLLLV
Best Arabidopsis Sequence Match ( AT4G16980.1 )
(BLAST)
001: MASSFSSQAF FLLTLSMVLI PFSLAQAPMM APSGSMSMPP MSSGGGSSVP PPVMSPMPMM TPPPMPMTPP PMPMTPPPMP MAPPPMPMAS PPMMPMTPST
101: SPSPLTVPDM PSPPMPSGME SSPSPGPMPP AMAASPDSGA FNVRNNVVTL SCVVGVVAAH FLLV
Arabidopsis Description
Arabinogalactan family protein [Source:UniProtKB/TrEMBL;Acc:Q9FT76]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.