Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76583 | Canola | plastid | 74.13 | 81.54 |
| CDY69842 | Canola | vacuole | 87.41 | 80.13 |
| Bra040103.1-P | Field mustard | plastid | 72.73 | 77.04 |
| CDY09660 | Canola | vacuole | 87.41 | 73.53 |
| CDX90494 | Canola | endoplasmic reticulum, extracellular, vacuole | 87.41 | 67.93 |
| AT4G16980.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 77.62 | 67.68 |
Protein Annotations
| EnsemblPlants:CDY42949 | EnsemblPlantsGene:GSBRNA2T00075726001 | ProteinID:CDY42949 | ProteinID:CDY42949.1 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EF46F8 | UniProt:A0A078I053 | MapMan:35.2 | : | : |
Description
BnaA01g18050DBnaA01g18050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I053]
Coordinates
chrLK032540:+:132479..133195
Molecular Weight (calculated)
14580.4 Da
IEP (calculated)
4.061
GRAVY (calculated)
0.285
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSQALFLV TLSMVLVSFS LAQSPMMAPS GSMSMPPMPS GGSPMPMTTP PPMPMMTPPP MPMAPPPMPM APSPMTPMSP STTPMGPSPA SVPDMASPPM
101: PAMESAPSPG PMPPMASPDS GAFNVRNDVV AFSFVVAAHL LLV
101: PAMESAPSPG PMPPMASPDS GAFNVRNDVV AFSFVVAAHL LLV
001: MASSFSSQAF FLLTLSMVLI PFSLAQAPMM APSGSMSMPP MSSGGGSSVP PPVMSPMPMM TPPPMPMTPP PMPMTPPPMP MAPPPMPMAS PPMMPMTPST
101: SPSPLTVPDM PSPPMPSGME SSPSPGPMPP AMAASPDSGA FNVRNNVVTL SCVVGVVAAH FLLV
101: SPSPLTVPDM PSPPMPSGME SSPSPGPMPP AMAASPDSGA FNVRNNVVTL SCVVGVVAAH FLLV
Arabidopsis Description
Arabinogalactan family protein [Source:UniProtKB/TrEMBL;Acc:Q9FT76]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.