Factsheet for Bra000204.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016705.1-P
Bra019660.1-P
Bra021502.1-P
Bra021503.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40765.1	Bra016705.1-P	AT1G14340.1	21798944
AT2G40765.1	Bra019660.1-P	AT1G14340.1	21798944
AT2G40765.1	Bra030034.1-P	AT1G27300.1	21798944
AT2G40765.1	Bra032817.1-P	AT1G27300.1	21798944
AT2G40765.1	Bra021502.1-P	AT3G13720.1	21798944
AT2G40765.1	Bra021503.1-P	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G40765.1	Thale cress	cytosol, extracellular	72.41	73.68

Protein Annotations

EnsemblPlants:Bra000204.1	EnsemblPlants:Bra000204.1-P	EnsemblPlantsGene:Bra000204	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005750	GO:GO:0016020	GO:GO:0016021	SEG:seg
TMHMM:TMhelix	UniParc:UPI00025402E2	UniProt:M4C7M6	MapMan:2.4.3.9	:	:

Description

AT2G40765 (E=2e-009) | unknown protein

Coordinates

chrA03:+:9863742..9864307

Molecular Weight (calculated)

5978.2 Da

IEP (calculated)

9.276

GRAVY (calculated)

0.086

Length

58 amino acids

Sequence
(BLAST)

1: MPGGGGGALK SLKPKIQSVD IQAAAGWGIA AAAGAIWVVQ PFDWIKKTFI DKPAAEEN

Best Arabidopsis Sequence Match ( AT2G40765.1 )
(BLAST)

1: MAGTSGLLNA VKPKIQTIDI QAAAGWGIAA AAGAIWVVQP FGWIKKTFID PPPTEEK

Arabidopsis Description

Putative uncharacterized protein At2g40765 [Source:UniProtKB/TrEMBL;Acc:Q94K78]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.