Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- golgi 2
- extracellular 3
- plastid 1
- cytosol 2
- mitochondrion 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14740 | Canola | cytosol, extracellular | 75.44 | 78.18 |
| CDY06965 | Canola | cytosol, extracellular | 73.68 | 76.36 |
| Bra000204.1-P | Field mustard | cytosol | 73.68 | 72.41 |
Protein Annotations
| MapMan:2.4.3.9 | EntrezGene:818673 | UniProt:A0A178VXI9 | ProteinID:AEC09875.1 | EMBL:AF370214 | ArrayExpress:AT2G40765 |
| EnsemblPlantsGene:AT2G40765 | RefSeq:AT2G40765 | TAIR:AT2G40765 | RefSeq:AT2G40765-TAIR-G | EnsemblPlants:AT2G40765.1 | TAIR:AT2G40765.1 |
| EMBL:AY085666 | EMBL:AY142541 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005750 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_565941.1 |
| ProteinID:OAP10554.1 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | UniProt:Q94K78 |
| TMHMM:TMhelix | UniParc:UPI00000AC005 | SEG:seg | : | : | : |
Description
Putative uncharacterized protein At2g40765 [Source:UniProtKB/TrEMBL;Acc:Q94K78]
Coordinates
chr2:+:17012176..17013325
Molecular Weight (calculated)
5976.3 Da
IEP (calculated)
9.320
GRAVY (calculated)
0.228
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGTSGLLNA VKPKIQTIDI QAAAGWGIAA AAGAIWVVQP FGWIKKTFID PPPTEEK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.