Factsheet for Bra033079.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 3
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003423.1-P
Bra007547.1-P
Bra014481.1-P
Bra026434.1-P
Bra033296.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G29034.1	Bra033296.1-P	AT1G01010.1	21798944
AT3G29034.1	Bra003423.1-P	AT3G60600.1	21798944
AT3G29034.1	Bra007547.1-P	AT3G60600.1	21798944
AT3G29034.1	Bra014481.1-P	AT3G60600.1	21798944
AT3G29034.1	Bra026434.1-P	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04051	Canola	cytosol, golgi, plastid	89.66	95.12
Bra025373.1-P	Field mustard	golgi	89.66	90.7
AT3G29034.1	Thale cress	cytosol	81.61	82.56
Solyc02g088130.1.1	Tomato	extracellular	35.63	63.27
KRH18466	Soybean	extracellular	36.78	60.38
Os04t0460350-00	Rice	extracellular	32.18	52.83
KXG26471	Sorghum	extracellular	29.89	49.06
TraesCS2A01G338500.1	Wheat	extracellular	29.89	49.06
TraesCS2B01G343400.1	Wheat	extracellular	29.89	49.06
TraesCS2D01G324500.1	Wheat	extracellular	29.89	49.06
HORVU2Hr1G080440.1	Barley	extracellular	28.74	47.17
Zm00001d003420_P001	Maize	extracellular	22.99	36.36

Protein Annotations

EnsemblPlants:Bra033079.1	EnsemblPlants:Bra033079.1-P	EnsemblPlantsGene:Bra033079	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002546E58	UniProt:M4EW95	MapMan:35.2

Description

AT3G29034 (E=2e-014) | unknown protein

Coordinates

chrA02:+:21515913..21516176

Molecular Weight (calculated)

9663.6 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.443

Length

87 amino acids

Sequence
(BLAST)

1: MVRQRRKSEK EEEKREQEDG EQEDQKVQPK QRSVSRRNMQ SLVIGLVGGA LTLGAYSQSY VSPGTSIGAG LFVLFFGLLV SEGFISL

Best Arabidopsis Sequence Match ( AT3G29034.1 )
(BLAST)

1: MVRERRKTEK VEEKREQEVV DQEEKVKPRQ RSVSRRNMQS LVIGLVGGAL TLGAYSQTYV DPGKSIGAGL FVLFFGLLVS EGFISL

Arabidopsis Description

At3g29034 [Source:UniProtKB/TrEMBL;Acc:Q8GX70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.