Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04051 | Canola | cytosol, golgi, plastid | 82.56 | 86.59 |
| Bra025373.1-P | Field mustard | golgi | 83.72 | 83.72 |
| CDX86393 | Canola | golgi | 83.72 | 83.72 |
| CDX85240 | Canola | golgi | 83.72 | 82.76 |
| Bra033079.1-P | Field mustard | golgi | 82.56 | 81.61 |
| Solyc02g088130.1.1 | Tomato | extracellular | 37.21 | 65.31 |
| KRH18466 | Soybean | extracellular | 37.21 | 60.38 |
| Os04t0460350-00 | Rice | extracellular | 32.56 | 52.83 |
| KXG26471 | Sorghum | extracellular | 31.4 | 50.94 |
| TraesCS2A01G338500.1 | Wheat | extracellular | 30.23 | 49.06 |
| TraesCS2B01G343400.1 | Wheat | extracellular | 30.23 | 49.06 |
| TraesCS2D01G324500.1 | Wheat | extracellular | 30.23 | 49.06 |
| HORVU2Hr1G080440.1 | Barley | extracellular | 29.07 | 47.17 |
| Zm00001d003420_P001 | Maize | extracellular | 24.42 | 38.18 |
Protein Annotations
| MapMan:35.2 | EntrezGene:822546 | UniProt:A0A178V9B3 | ProteinID:AEE77526.1 | EMBL:AK118404 | ArrayExpress:AT3G29034 |
| EnsemblPlantsGene:AT3G29034 | RefSeq:AT3G29034 | TAIR:AT3G29034 | RefSeq:AT3G29034-TAIR-G | EnsemblPlants:AT3G29034.1 | TAIR:AT3G29034.1 |
| EMBL:BT004673 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_850646.1 |
| ProteinID:OAP01583.1 | PO:PO:0000293 | UniProt:Q8GX70 | TMHMM:TMhelix | UniParc:UPI000000C41C | SEG:seg |
Description
At3g29034 [Source:UniProtKB/TrEMBL;Acc:Q8GX70]
Coordinates
chr3:-:11030035..11030906
Molecular Weight (calculated)
9643.8 Da
IEP (calculated)
10.100
GRAVY (calculated)
-0.252
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MVRERRKTEK VEEKREQEVV DQEEKVKPRQ RSVSRRNMQS LVIGLVGGAL TLGAYSQTYV DPGKSIGAGL FVLFFGLLVS EGFISL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.