Factsheet for Bra005866.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 2
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000242.1-P
Bra000640.1-P
Bra001098.1-P
Bra001306.1-P
Bra001786.1-P
Bra001787.1-P
Bra003423.1-P
Bra003427.1-P
Bra003512.1-P
Bra004442.1-P
Bra004654.1-P
Bra006289.1-P
Bra006454.1-P
Bra007547.1-P
Bra007556.1-P
Bra008713.1-P
Bra009989.1-P
Bra010500.1-P
Bra011119.1-P
Bra011260.1-P
Bra012567.1-P
Bra013361.1-P
Bra013774.1-P
Bra014387.1-P
Bra014472.1-P
Bra014481.1-P
Bra015145.1-P
Bra016706.1-P
Bra016913.1-P
Bra018026.1-P
Bra019662.1-P
Bra021478.1-P
Bra022177.1-P
Bra023511.1-P
Bra024012.1-P
Bra024481.1-P
Bra024985.1-P
Bra024986.1-P
Bra026839.1-P
Bra027986.1-P
Bra029771.1-P
Bra029928.1-P
Bra030034.1-P
Bra030509.1-P
Bra032150.1-P
Bra032586.1-P
Bra032817.1-P
Bra032828.1-P
Bra033296.1-P
Bra033346.1-P
Bra034070.1-P
Bra035298.1-P
Bra035787.1-P
Bra036117.1-P
Bra036285.1-P
Bra037242.1-P
Bra038695.1-P
Bra039150.1-P
Bra039911.1-P
Bra040115.1-P
Bra040145.1-P
Bra040207.1-P
Bra040415.1-P
Bra040903.1-P
Bra040904.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G05760.1	Bra033296.1-P	AT1G01010.1	21798944
AT5G05760.1	Bra022177.1-P	AT1G02780.1	24556609
AT5G05760.1	Bra030509.1-P	AT1G02780.1	24556609
AT5G05760.1	Bra032586.1-P	AT1G02780.1	24556609
AT5G05760.1	Bra033346.1-P	AT1G02780.1	24556609
AT5G05760.1	Bra036285.1-P	AT1G02780.1	24556609
AT5G05760.1	Bra016706.1-P	AT1G14320.1	24556609
AT5G05760.1	Bra019662.1-P	AT1G14320.1	24556609
AT5G05760.1	Bra026839.1-P	AT1G14320.1	24556609
AT5G05760.1	Bra030034.1-P	AT1G27300.1	21798944
AT5G05760.1	Bra032817.1-P	AT1G27300.1	21798944
AT5G05760.1	Bra032828.1-P	AT1G27400.1	24556609
AT5G05760.1	Bra024985.1-P	AT1G43170.1	24556609
AT5G05760.1	Bra024986.1-P	AT1G43170.1	24556609
AT5G05760.1	Bra027986.1-P	AT1G43170.1	24556609
AT5G05760.1	Bra035298.1-P	AT1G43170.1	24556609
AT5G05760.1	Bra015145.1-P	AT2G04280.1	24556609
AT5G05760.1	Bra024481.1-P	AT2G18020.1	24556609
AT5G05760.1	Bra037242.1-P	AT2G18020.1	24556609
AT5G05760.1	Bra039911.1-P	AT2G18020.1	24556609
AT5G05760.1	Bra021478.1-P	AT3G02080.1	24556609
AT5G05760.1	Bra039150.1-P	AT3G02080.1	24556609
AT5G05760.1	Bra040115.1-P	AT3G04920.1	24556609
AT5G05760.1	Bra040415.1-P	AT3G04920.1	24556609
AT5G05760.1	Bra001306.1-P	AT3G09500.1	24556609
AT5G05760.1	Bra029771.1-P	AT3G09500.1	24556609
AT5G05760.1	Bra034070.1-P	AT3G09500.1	24556609
AT5G05760.1	Bra038695.1-P	AT3G12030.1	24556609
AT5G05760.1	Bra000640.1-P	AT3G20370.1	24556609
AT5G05760.1	Bra001786.1-P	AT3G20370.1	24556609
AT5G05760.1	Bra001787.1-P	AT3G20370.1	24556609
AT5G05760.1	Bra032150.1-P	AT3G20370.1	24556609
AT5G05760.1	Bra035787.1-P	AT3G20370.1	24556609
AT5G05760.1	Bra040903.1-P	AT3G20370.1	24556609
AT5G05760.1	Bra040904.1-P	AT3G20370.1	24556609
AT5G05760.1	Bra018026.1-P	AT3G48930.1	24556609
AT5G05760.1	Bra029928.1-P	AT3G48930.1	24556609
AT5G05760.1	Bra000242.1-P	AT3G57490.1	24556609
AT5G05760.1	Bra004654.1-P	AT3G57490.1	24556609
AT5G05760.1	Bra016913.1-P	AT3G57490.1	24556609
AT5G05760.1	Bra003423.1-P	AT3G60600.1	21798944
AT5G05760.1	Bra007547.1-P	AT3G60600.1	21798944
AT5G05760.1	Bra014481.1-P	AT3G60600.1	21798944
AT5G05760.1	Bra003427.1-P	AT3G60770.1	24556609
AT5G05760.1	Bra007556.1-P	AT3G60770.1	24556609
AT5G05760.1	Bra014472.1-P	AT3G60770.1	24556609
AT5G05760.1	Bra003512.1-P	AT3G62870.1	24556609
AT5G05760.1	Bra004442.1-P	AT3G62870.1	24556609
AT5G05760.1	Bra014387.1-P	AT3G62870.1	24556609
AT5G05760.1	Bra012567.1-P	AT4G19030.1	21798944
AT5G05760.1	Bra013361.1-P	AT4G19030.1	21798944
AT5G05760.1	Bra010500.1-P	AT4G24190.1	24556609
AT5G05760.1	Bra013774.1-P	AT4G24190.1	24556609
AT5G05760.1	Bra011119.1-P	AT4G29520.1	24556609
AT5G05760.1	Bra011260.1-P	AT4G31340.1	24556609
AT5G05760.1	Bra024012.1-P	AT4G31340.1	24556609
AT5G05760.1	Bra006289.1-P	AT5G15200.1	24556609
AT5G05760.1	Bra008713.1-P	AT5G15200.1	24556609
AT5G05760.1	Bra023511.1-P	AT5G15200.1	24556609
AT5G05760.1	Bra001098.1-P	AT5G18380.1	24556609
AT5G05760.1	Bra006454.1-P	AT5G18380.1	24556609
AT5G05760.1	Bra040145.1-P	AT5G18380.1	24556609
AT5G05760.1	Bra040207.1-P	AT5G18380.1	24556609
AT5G05760.1	Bra009989.1-P	AT5G28060.1	24556609
AT5G05760.1	Bra036117.1-P	AT5G28060.1	24556609

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11339	Canola	cytosol, plastid	98.24	98.24
AT5G05760.1	Thale cress	cytosol	75.0	75.89
KRH73168	Soybean	cytosol	65.0	65.97
KRH15025	Soybean	cytosol	62.65	63.96
PGSC0003DMT400047329	Potato	cytosol, plastid	59.71	60.6
KRH14969	Soybean	cytosol	41.47	58.26
Solyc07g054140.2.1	Tomato	cytosol, plastid	54.12	57.86
VIT_13s0067g00280.t01	Wine grape	plastid	62.94	54.18
Bra015036.1-P	Field mustard	cytosol	45.59	45.06
Bra001945.1-P	Field mustard	cytosol	46.47	43.05
Bra028370.1-P	Field mustard	cytosol	36.18	41.41

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.1.3	EnsemblPlantsGene:Bra005866	EnsemblPlants:Bra005866.1	EnsemblPlants:Bra005866.1-P	GO:GO:0003674
GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009504	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0043231	GO:GO:0061025
InterPro:IPR000727	UniProt:M4CNS8	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF117	SMART:SM00397	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	TMHMM:TMhelix
InterPro:T_SNARE_dom	UniParc:UPI000253F5D0	SEG:seg	:	:	:

Description

AT5G05760 (E=9e-132) SYP31, ATSED5, ATSYP31, SED5 | SYP31 (SYNTAXIN OF PLANTS 31); SNAP receptor

Coordinates

chrA03:-:986452..988535

Molecular Weight (calculated)

37541.7 Da

IEP (calculated)

9.717

GRAVY (calculated)

-0.356

Length

340 amino acids

Sequence
(BLAST)

001: MGSAFRDRTA EFRSLSQTLK KIGAAIPSVH QAESDPTSSK RSSPGSSRSE FNKKASQIGL RIHETSQKTA RLAKLAKESS IFNDRTLEIQ ELTVLIRNDI
101: TGLNMALSDL QTLQNMEIAD GSYSHDKVGH YTAVCDDLKT RLMGATKQFQ DVLTARSENM KAHENRKQLF SAKNAAVDNQ NNAKAVPEPP PWSSSSVPSG
201: NLQQQPLLPP VNSGASSGSQ LRRRSAIENA PSQQMEMSML QQTVPRQESY SQNRAVALHS VESTITELSG IFTHLATMVT QQGELAIRID DNMDESLVNV
301: EGARSALLQH LTRISSNRWL MIKIFAVIIL FLIVFLFFVA

Best Arabidopsis Sequence Match ( AT5G05760.1 )
(BLAST)

001: MGSTFRDRTV ELHSLSQTLK KIGAIPSVHQ DEDDPASSKR SSPGSEFNKK ASRIGLGIKE TSQKITRLAK LAKQSTIFND RTVEIQELTV LIRNDITGLN
101: MALSDLQTLQ NMELADGNYS QDQVGHYTAV CDDLKTRLMG ATKQLQDVLT TRSENMKAHE NRKQLFSTKN AVDSPPQNNA KSVPEPPPWS SSSNPFGNLQ
201: QPLLPPLNTG APPGSQLRRR SAIENAPSQQ MEMSLLQQTV PKQENYSQSR AVALHSVESR ITELSGIFPQ LATMVTQQGE LAIRIDDNMD ESLVNVEGAR
301: SALLQHLTRI SSNRWLMMKI FAVIILFLIV FLFFVA

Arabidopsis Description

SYP31Syntaxin-31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.