Factsheet for Bra037242.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 2
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	81.53	77.58
Bra039912.1-P	Field mustard	cytosol	40.76	71.11
Bra024481.1-P	Field mustard	mitochondrion	93.63	57.42
Bra039911.1-P	Field mustard	cytosol, mitochondrion	92.99	56.59
AT2G18020.1	Thale cress	cytosol, mitochondrion	91.72	55.81
Bra010550.1-P	Field mustard	mitochondrion	89.17	54.26
KRH28784	Soybean	mitochondrion	89.81	54.02
KRH69797	Soybean	mitochondrion	89.17	53.85
KRH08094	Soybean	nucleus	89.17	53.85
Bra011664.1-P	Field mustard	cytosol, mitochondrion	87.9	53.49
PGSC0003DMT400049608	Potato	cytosol, mitochondrion	88.53	53.46
Solyc07g063890.2.1	Tomato	extracellular, unclear	88.53	53.46
KRH76671	Soybean	mitochondrion	88.53	53.26
Bra017749.1-P	Field mustard	mitochondrion	90.45	53.18
VIT_04s0023g03210.t01	Wine grape	mitochondrion	87.9	53.08
PGSC0003DMT400064385	Potato	cytosol, mitochondrion	87.9	53.08
PGSC0003DMT400056142	Potato	cytosol	87.9	53.08
Solyc12g005330.1.1	Tomato	nucleus	87.26	52.69
Solyc10g006580.2.1	Tomato	nucleus, plastid, unclear	87.26	52.69
Zm00001d019473_P001	Maize	plastid	87.26	52.69
EER96269	Sorghum	mitochondrion	87.26	52.49
KXG23748	Sorghum	mitochondrion	87.26	52.49
Zm00001d030691_P001	Maize	mitochondrion	86.62	52.11
Zm00001d041568_P001	Maize	plasma membrane	86.62	52.11
Bra012864.1-P	Field mustard	mitochondrion	85.35	51.74
Os12t0567700-01	Rice	nucleus, plasma membrane	85.99	51.72
GSMUA_Achr5P18740_001	Banana	mitochondrion	85.99	51.72
GSMUA_Achr11P...	Banana	mitochondrion	85.99	51.72
TraesCS4A01G189200.1	Wheat	mitochondrion	85.35	51.34
TraesCS4B01G128700.1	Wheat	mitochondrion	85.35	51.34
TraesCS4D01G123700.1	Wheat	golgi	85.35	51.34
TraesCS5A01G082800.1	Wheat	mitochondrion	85.35	51.34
TraesCS5B01G088900.1	Wheat	mitochondrion	85.35	51.34
TraesCS5D01G095400.1	Wheat	mitochondrion	85.35	51.34
HORVU5Hr1G021730.2	Barley	cytosol	85.35	47.69
TraesCS4A01G007200.1	Wheat	mitochondrion	77.71	46.74
TraesCS4B01G297800.1	Wheat	mitochondrion	77.71	46.74
TraesCS4D01G296600.1	Wheat	mitochondrion	77.07	46.36
HORVU4Hr1G077020.1	Barley	mitochondrion	76.43	45.98
OQU78327	Sorghum	mitochondrion	71.97	43.46
EES18535	Sorghum	mitochondrion	71.97	43.46
Bra036831.1-P	Field mustard	cytosol	49.04	35.98
Bra040982.1-P	Field mustard	cytosol, mitochondrion	25.48	24.24
Bra004801.1-P	Field mustard	mitochondrion	24.2	17.76
TraesCS7D01G254900.1	Wheat	cytosol	0.64	1.41

Protein Annotations

MapMan:17.1.2.1.7	Gene3D:2.30.30.30	Gene3D:4.10.950.10	EnsemblPlantsGene:Bra037242	EnsemblPlants:Bra037242.1	EnsemblPlants:Bra037242.1-P
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR014722	InterPro:IPR014726	UniProt:M4F831	PFAM:PF03947
PANTHER:PTHR13691	PANTHER:PTHR13691:SF33	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_dom3
SMART:SM01382	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0002541E6B	SEG:seg	:

Description

AT2G18020 (E=1e-047) EMB2296 | EMB2296 (embryo defective 2296); structural constituent of ribosome

Coordinates

chrA09:+:4821317..4822417

Molecular Weight (calculated)

16566.1 Da

IEP (calculated)

10.879

GRAVY (calculated)

-0.268

Length

157 amino acids

Sequence
(BLAST)

001: MHYLKRLHFL YCAKKATLVI GNVLPLRAIP EGAVVCNVEH HVGDRGVLAR ASGDYAIVIS HNPYNDTTRI KLPSGSKKIV PSGCRAMIGQ VAGGGRTEKP
101: MLKAGNAYHN GGGNHQHIGH ASTVRHDAPP GQKVGLIAAR RTGRLRGQAA ASAAKAD

Best Arabidopsis Sequence Match ( AT2G18020.1 )
(BLAST)

001: MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDFGERNGY LKGVVTEIIH DPGRGAPLAR VTFRHPFRFK KQKELFVAAE GMYTGQFLYC GKKATLVVGN
101: VLPLRSIPEG AVVCNVEHHV GDRGVLARAS GDYAIVIAHN PDSDTTRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNSWPKVR
201: GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA AASAAKAD

Arabidopsis Description

RPL8AEMB2296 [Source:UniProtKB/TrEMBL;Acc:A0A178VSS0]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.