Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G007200.1 | Wheat | mitochondrion | 99.23 | 99.23 |
| TraesCS4B01G297800.1 | Wheat | mitochondrion | 97.32 | 97.32 |
| HORVU4Hr1G077020.1 | Barley | mitochondrion | 96.55 | 96.55 |
| CDX90658 | Canola | extracellular | 83.91 | 84.56 |
| Bra012864.1-P | Field mustard | mitochondrion | 83.52 | 84.17 |
| Bra039911.1-P | Field mustard | cytosol, mitochondrion | 82.38 | 83.33 |
| VIT_19s0014g04760.t01 | Wine grape | cytosol, mitochondrion | 82.76 | 83.08 |
| OQU78327 | Sorghum | mitochondrion | 82.76 | 83.08 |
| EES18535 | Sorghum | mitochondrion | 82.76 | 83.08 |
| VIT_12s0134g00060.t01 | Wine grape | cytosol, mitochondrion | 82.76 | 83.08 |
| VIT_04s0023g03210.t01 | Wine grape | mitochondrion | 82.76 | 83.08 |
| GSMUA_Achr11P... | Banana | cytosol | 52.49 | 83.03 |
| TraesCS5D01G095400.1 | Wheat | mitochondrion | 82.76 | 82.76 |
| TraesCS4D01G123700.1 | Wheat | golgi | 82.76 | 82.76 |
| GSMUA_Achr11P... | Banana | mitochondrion | 82.76 | 82.76 |
| CDY47054 | Canola | extracellular | 81.61 | 82.56 |
| CDX72577 | Canola | cytosol, mitochondrion | 81.61 | 82.56 |
| CDX69201 | Canola | cytosol, mitochondrion | 81.61 | 82.56 |
| GSMUA_Achr5P18740_001 | Banana | mitochondrion | 82.38 | 82.38 |
| CDY20905 | Canola | mitochondrion | 73.95 | 82.13 |
| CDY25126 | Canola | mitochondrion | 73.95 | 82.13 |
| PGSC0003DMT400056142 | Potato | cytosol | 81.61 | 81.92 |
| PGSC0003DMT400064385 | Potato | cytosol, mitochondrion | 81.61 | 81.92 |
| PGSC0003DMT400049608 | Potato | cytosol, mitochondrion | 81.61 | 81.92 |
| Solyc07g063890.2.1 | Tomato | extracellular, unclear | 81.61 | 81.92 |
| Solyc10g006580.2.1 | Tomato | nucleus, plastid, unclear | 81.61 | 81.92 |
| Solyc12g005330.1.1 | Tomato | nucleus | 81.61 | 81.92 |
| Bra010550.1-P | Field mustard | mitochondrion | 80.84 | 81.78 |
| AT2G18020.1 | Thale cress | cytosol, mitochondrion | 80.84 | 81.78 |
| CDY38171 | Canola | mitochondrion | 73.56 | 81.7 |
| KRH76671 | Soybean | mitochondrion | 81.61 | 81.61 |
| CDY24796 | Canola | mitochondrion | 80.46 | 81.4 |
| CDX75555 | Canola | cytosol | 55.17 | 81.36 |
| CDY29006 | Canola | mitochondrion | 80.46 | 81.08 |
| Bra011664.1-P | Field mustard | cytosol, mitochondrion | 80.08 | 81.01 |
| KRH28784 | Soybean | mitochondrion | 80.84 | 80.84 |
| AT4G36130.1 | Thale cress | mitochondrion | 79.69 | 80.62 |
| KRH69797 | Soybean | mitochondrion | 80.08 | 80.38 |
| KRH08094 | Soybean | nucleus | 80.08 | 80.38 |
| Bra024481.1-P | Field mustard | mitochondrion | 78.54 | 80.08 |
| CDY29217 | Canola | cytosol | 47.13 | 79.87 |
| CDY35456 | Canola | cytosol, mitochondrion | 80.08 | 78.87 |
| Bra017749.1-P | Field mustard | mitochondrion | 80.46 | 78.65 |
| AT3G51190.1 | Thale cress | mitochondrion | 77.39 | 77.69 |
| Bra037242.1-P | Field mustard | mitochondrion | 46.36 | 77.07 |
| CDY38172 | Canola | nucleus | 15.33 | 72.73 |
| CDY25127 | Canola | cytosol | 29.5 | 70.64 |
| Bra039912.1-P | Field mustard | cytosol | 22.22 | 64.44 |
| CDY54550 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.95 | 58.11 |
| CDY30333 | Canola | extracellular | 21.46 | 49.12 |
| TraesCS1D01G179700.1 | Wheat | plastid | 23.75 | 41.33 |
| TraesCS1D01G298800.1 | Wheat | plastid | 19.16 | 40.0 |
| TraesCS7D01G254600.1 | Wheat | mitochondrion | 20.31 | 39.26 |
| TraesCS4D01G043800.1 | Wheat | plastid | 22.61 | 38.31 |
| TraesCS5D01G008500.1 | Wheat | cytosol, mitochondrion | 19.92 | 34.9 |
| TraesCS2D01G264000.1 | Wheat | cytosol, mitochondrion | 21.84 | 34.55 |
| TraesCS5D01G458000.1 | Wheat | cytosol | 21.84 | 34.55 |
| TraesCS3D01G499500.1 | Wheat | cytosol, mitochondrion | 21.46 | 33.94 |
| TraesCS6D01G175200.1 | Wheat | cytosol, mitochondrion | 21.46 | 33.94 |
| TraesCS3D01G469700.1 | Wheat | cytosol, mitochondrion | 20.31 | 32.12 |
| TraesCS1D01G010400.1 | Wheat | mitochondrion | 28.74 | 23.51 |
| TraesCS4D01G362200.1 | Wheat | cytosol | 4.6 | 17.14 |
| TraesCS5D01G345600.1 | Wheat | cytosol | 0.38 | 1.41 |
| TraesCS6D01G080000.1 | Wheat | cytosol | 0.38 | 1.41 |
| TraesCS5D01G219800.1 | Wheat | cytosol | 0.38 | 1.41 |
| TraesCS5D01G008400.1 | Wheat | cytosol | 0.38 | 1.41 |
| TraesCS7D01G254900.1 | Wheat | cytosol | 0.38 | 1.41 |
| TraesCS4D01G043700.1 | Wheat | cytosol | 0.38 | 1.41 |
Protein Annotations
| MapMan:17.1.2.1.7 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | Gene3D:4.10.950.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | InterPro:IPR014722 | InterPro:IPR014726 |
| HAMAP:MF_01320_A | InterPro:NA-bd_OB-fold | PFAM:PF00181 | PFAM:PF03947 | PIRSF:PIRSF002158 | ScanProsite:PS00467 |
| PANTHER:PTHR13691 | PANTHER:PTHR13691:SF18 | InterPro:Rbsml_prot_L2_RNA-bd_dom | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L2 | InterPro:Ribosomal_L2_C |
| InterPro:Ribosomal_L2_CS | InterPro:Ribosomal_L2_arc | InterPro:Ribosomal_L2_dom3 | SMART:SM01382 | SMART:SM01383 | SUPFAM:SSF50104 |
| SUPFAM:SSF50249 | EnsemblPlantsGene:TraesCS4D01G296600 | EnsemblPlants:TraesCS4D01G296600.1 | InterPro:Translation_prot_SH3-like_sf | : | : |
Description
No Description!
Coordinates
chr4D:-:465953655..465954549
Molecular Weight (calculated)
28071.7 Da
IEP (calculated)
11.741
GRAVY (calculated)
-0.540
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVIRAQRK GAGSVFKSHT HHRQGPARFR ALDYGERNGY LKGVVTDIVH DPGRGAPLAR LDFRDPVRYK HRKELFVAAE GMYTGQSVYC GRRAVVAIGN
101: VLPLASLPEG AVVCNVEQHV GDRGALARAS GDYAIVISHN SENGTTRIKL PSGAKKVVQS GCRAMVGQVA GGGRTEKPLL KAGRAYHKFR VKRNSWPRVR
201: GVAMNPVDHP HGGGNHQHIG HASTVRRDAP PGQKVGQVGA RRTGRLRGQA AVNASKDSRA A
101: VLPLASLPEG AVVCNVEQHV GDRGALARAS GDYAIVISHN SENGTTRIKL PSGAKKVVQS GCRAMVGQVA GGGRTEKPLL KAGRAYHKFR VKRNSWPRVR
201: GVAMNPVDHP HGGGNHQHIG HASTVRRDAP PGQKVGQVGA RRTGRLRGQA AVNASKDSRA A
001: MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDFGERNGY LKGVVTEIIH DPGRGAPLAR VTFRHPFRFK KQKELFVAAE GMYTGQFLYC GKKATLVVGN
101: VLPLRSIPEG AVVCNVEHHV GDRGVLARAS GDYAIVIAHN PDSDTTRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNSWPKVR
201: GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA AASAAKAD
101: VLPLRSIPEG AVVCNVEHHV GDRGVLARAS GDYAIVIAHN PDSDTTRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNSWPKVR
201: GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA AASAAKAD
Arabidopsis Description
RPL8AEMB2296 [Source:UniProtKB/TrEMBL;Acc:A0A178VSS0]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.