Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90658 | Canola | extracellular | 89.23 | 89.58 |
| Bra012864.1-P | Field mustard | mitochondrion | 88.85 | 89.19 |
| CDY29006 | Canola | mitochondrion | 88.85 | 89.19 |
| AT2G18020.1 | Thale cress | cytosol, mitochondrion | 87.31 | 87.98 |
| AT4G36130.1 | Thale cress | mitochondrion | 87.31 | 87.98 |
| Solyc12g005330.1.1 | Tomato | nucleus | 85.0 | 85.0 |
| PGSC0003DMT400056142 | Potato | cytosol | 85.0 | 85.0 |
| KRH28784 | Soybean | mitochondrion | 85.0 | 84.67 |
| VIT_04s0023g03210.t01 | Wine grape | mitochondrion | 84.62 | 84.62 |
| KRH08094 | Soybean | nucleus | 84.23 | 84.23 |
| Solyc10g006580.2.1 | Tomato | nucleus, plastid, unclear | 84.23 | 84.23 |
| PGSC0003DMT400064385 | Potato | cytosol, mitochondrion | 84.23 | 84.23 |
| PGSC0003DMT400049608 | Potato | cytosol, mitochondrion | 84.23 | 84.23 |
| KRH69797 | Soybean | mitochondrion | 84.23 | 84.23 |
| Solyc07g063890.2.1 | Tomato | extracellular, unclear | 83.85 | 83.85 |
| KRH76671 | Soybean | mitochondrion | 83.85 | 83.52 |
| GSMUA_Achr11P... | Banana | mitochondrion | 83.85 | 83.52 |
| GSMUA_Achr5P18740_001 | Banana | mitochondrion | 83.46 | 83.14 |
| TraesCS5A01G082800.1 | Wheat | mitochondrion | 82.31 | 81.99 |
| TraesCS5B01G088900.1 | Wheat | mitochondrion | 82.31 | 81.99 |
| KXG23748 | Sorghum | mitochondrion | 82.31 | 81.99 |
| TraesCS4D01G123700.1 | Wheat | golgi | 82.31 | 81.99 |
| Os12t0567700-01 | Rice | nucleus, plasma membrane | 82.31 | 81.99 |
| TraesCS5D01G095400.1 | Wheat | mitochondrion | 82.31 | 81.99 |
| EER96269 | Sorghum | mitochondrion | 82.31 | 81.99 |
| TraesCS4B01G128700.1 | Wheat | mitochondrion | 82.31 | 81.99 |
| TraesCS4A01G189200.1 | Wheat | mitochondrion | 82.31 | 81.99 |
| Zm00001d019473_P001 | Maize | plastid | 81.92 | 81.92 |
| Zm00001d041568_P001 | Maize | plasma membrane | 81.54 | 81.23 |
| Zm00001d030691_P001 | Maize | mitochondrion | 81.54 | 81.23 |
| GSMUA_Achr11P... | Banana | cytosol | 51.54 | 81.21 |
| OQU78327 | Sorghum | mitochondrion | 80.38 | 80.38 |
| EES18535 | Sorghum | mitochondrion | 80.38 | 80.38 |
| HORVU4Hr1G077020.1 | Barley | mitochondrion | 78.46 | 78.16 |
| TraesCS4A01G007200.1 | Wheat | mitochondrion | 77.69 | 77.39 |
| TraesCS4B01G297800.1 | Wheat | mitochondrion | 77.69 | 77.39 |
| TraesCS4D01G296600.1 | Wheat | mitochondrion | 77.69 | 77.39 |
| HORVU5Hr1G021730.2 | Barley | cytosol | 82.31 | 76.16 |
| ATCG01310.1 | Thale cress | cytosol, plastid | 30.77 | 29.2 |
| ATCG00830.1 | Thale cress | cytosol, plastid | 30.77 | 29.2 |
| AT2G44065.3 | Thale cress | mitochondrion | 22.31 | 27.1 |
| TraesCS7D01G254900.1 | Wheat | cytosol | 0.38 | 1.41 |
Protein Annotations
| MapMan:17.1.2.1.7 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | Gene3D:4.10.950.10 | EntrezGene:824282 | UniProt:A0A178VL50 |
| ProteinID:AEE78761.1 | ArrayExpress:AT3G51190 | EnsemblPlantsGene:AT3G51190 | RefSeq:AT3G51190 | TAIR:AT3G51190 | RefSeq:AT3G51190-TAIR-G |
| EnsemblPlants:AT3G51190.1 | TAIR:AT3G51190.1 | Unigene:At.53884 | ProteinID:CAB62641.1 | EMBL:DQ056619 | GO:GO:0002181 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 |
| GO:GO:0019538 | GO:GO:0022625 | GO:GO:0022626 | GO:GO:0030529 | GO:GO:0042788 | InterPro:IPR014722 |
| InterPro:IPR014726 | HAMAP:MF_01320_A | InterPro:NA-bd_OB-fold | RefSeq:NP_190687.2 | ProteinID:OAP06448.1 | PFAM:PF00181 |
| PFAM:PF03947 | PIRSF:PIRSF002158 | ScanProsite:PS00467 | PANTHER:PTHR13691 | PANTHER:PTHR13691:SF33 | UniProt:Q4PSL7 |
| InterPro:Rbsml_prot_L2_RNA-bd_dom | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L2 | InterPro:Ribosomal_L2_C | InterPro:Ribosomal_L2_CS | InterPro:Ribosomal_L2_arc |
| InterPro:Ribosomal_L2_dom3 | SMART:SM01382 | SMART:SM01383 | SUPFAM:SSF50104 | SUPFAM:SSF50249 | InterPro:Translation_prot_SH3-like_sf |
| UniParc:UPI000053119B | SEG:seg | : | : | : | : |
Description
RPL8B60S ribosomal protein L8-2 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSL7]
Coordinates
chr3:-:19016519..19017547
Molecular Weight (calculated)
27999.0 Da
IEP (calculated)
11.149
GRAVY (calculated)
-0.432
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVIRAQRK GAAGSVFKSH THHRKGPAKF RSLDYGERNG YLKGLVTEII HDPGRGAPLA RVAFRHPFRY MKQKELFVAA EGMYTGQYLY CGKKANLMVG
101: NVLPLGSIPE GAVICNVELH VGDRGALARA SGDYAIVIAH NPESNTTRVK LPSGSKKILP SACRAMIGQV AGGGRTEKPL LKAGNAYHKY KAKRNCWPVV
201: RGVAMNPVEH PHGGGNHQHI GHASTVRRDK SAGAKVGQIA ARRTGRRRGA AATLAAKADY
101: NVLPLGSIPE GAVICNVELH VGDRGALARA SGDYAIVIAH NPESNTTRVK LPSGSKKILP SACRAMIGQV AGGGRTEKPL LKAGNAYHKY KAKRNCWPVV
201: RGVAMNPVEH PHGGGNHQHI GHASTVRRDK SAGAKVGQIA ARRTGRRRGA AATLAAKADY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.