Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29217 | Canola | cytosol | 58.53 | 98.05 |
| CDY20905 | Canola | mitochondrion | 88.76 | 97.45 |
| CDY25126 | Canola | mitochondrion | 88.76 | 97.45 |
| CDY38171 | Canola | mitochondrion | 88.37 | 97.02 |
| Bra039911.1-P | Field mustard | cytosol, mitochondrion | 96.9 | 96.9 |
| AT4G36130.1 | Thale cress | mitochondrion | 96.51 | 96.51 |
| Bra024481.1-P | Field mustard | mitochondrion | 94.19 | 94.92 |
| VIT_04s0023g03210.t01 | Wine grape | mitochondrion | 94.57 | 93.85 |
| PGSC0003DMT400056142 | Potato | cytosol | 94.19 | 93.46 |
| Solyc12g005330.1.1 | Tomato | nucleus | 93.8 | 93.08 |
| PGSC0003DMT400049608 | Potato | cytosol, mitochondrion | 93.8 | 93.08 |
| Solyc07g063890.2.1 | Tomato | extracellular, unclear | 93.41 | 92.69 |
| PGSC0003DMT400064385 | Potato | cytosol, mitochondrion | 93.41 | 92.69 |
| KRH28784 | Soybean | mitochondrion | 93.41 | 92.34 |
| Solyc10g006580.2.1 | Tomato | nucleus, plastid, unclear | 93.02 | 92.31 |
| GSMUA_Achr11P... | Banana | cytosol | 58.91 | 92.12 |
| KRH76671 | Soybean | mitochondrion | 93.02 | 91.95 |
| Bra037242.1-P | Field mustard | mitochondrion | 55.81 | 91.72 |
| Zm00001d019473_P001 | Maize | plastid | 92.25 | 91.54 |
| KRH08094 | Soybean | nucleus | 92.25 | 91.54 |
| KRH69797 | Soybean | mitochondrion | 92.25 | 91.54 |
| TraesCS5B01G088900.1 | Wheat | mitochondrion | 92.25 | 91.19 |
| TraesCS4A01G189200.1 | Wheat | mitochondrion | 92.25 | 91.19 |
| TraesCS4B01G128700.1 | Wheat | mitochondrion | 92.25 | 91.19 |
| TraesCS4D01G123700.1 | Wheat | golgi | 92.25 | 91.19 |
| TraesCS5A01G082800.1 | Wheat | mitochondrion | 92.25 | 91.19 |
| TraesCS5D01G095400.1 | Wheat | mitochondrion | 92.25 | 91.19 |
| KXG23748 | Sorghum | mitochondrion | 91.86 | 90.8 |
| Zm00001d030691_P001 | Maize | mitochondrion | 91.86 | 90.8 |
| Zm00001d041568_P001 | Maize | plasma membrane | 91.86 | 90.8 |
| Os12t0567700-01 | Rice | nucleus, plasma membrane | 91.86 | 90.8 |
| GSMUA_Achr11P... | Banana | mitochondrion | 91.86 | 90.8 |
| EER96269 | Sorghum | mitochondrion | 91.86 | 90.8 |
| GSMUA_Achr5P18740_001 | Banana | mitochondrion | 91.47 | 90.42 |
| AT3G51190.1 | Thale cress | mitochondrion | 87.98 | 87.31 |
| HORVU5Hr1G021730.2 | Barley | cytosol | 92.25 | 84.7 |
| HORVU4Hr1G077020.1 | Barley | mitochondrion | 83.33 | 82.38 |
| TraesCS4A01G007200.1 | Wheat | mitochondrion | 82.56 | 81.61 |
| TraesCS4B01G297800.1 | Wheat | mitochondrion | 82.56 | 81.61 |
| TraesCS4D01G296600.1 | Wheat | mitochondrion | 81.78 | 80.84 |
| OQU78327 | Sorghum | mitochondrion | 79.84 | 79.23 |
| EES18535 | Sorghum | mitochondrion | 79.84 | 79.23 |
| ATCG01310.1 | Thale cress | cytosol, plastid | 29.84 | 28.1 |
| ATCG00830.1 | Thale cress | cytosol, plastid | 29.84 | 28.1 |
| AT2G44065.3 | Thale cress | mitochondrion | 20.93 | 25.23 |
| TraesCS7D01G254900.1 | Wheat | cytosol | 0.39 | 1.41 |
Protein Annotations
| MapMan:17.1.2.1.7 | Gene3D:2.30.30.30 | Gene3D:2.40.50.140 | Gene3D:4.10.950.10 | EntrezGene:816314 | UniProt:A0A178VSS0 |
| ProteinID:AAD20124.1 | ProteinID:AEC06716.1 | ArrayExpress:AT2G18020 | EnsemblPlantsGene:AT2G18020 | RefSeq:AT2G18020 | TAIR:AT2G18020 |
| RefSeq:AT2G18020-TAIR-G | EnsemblPlants:AT2G18020.1 | TAIR:AT2G18020.1 | EMBL:AY128314 | EMBL:BT001177 | Symbol:EMB2296 |
| GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0016020 | GO:GO:0019538 |
| GO:GO:0022625 | GO:GO:0022626 | GO:GO:0030529 | GO:GO:0042788 | InterPro:IPR014722 | InterPro:IPR014726 |
| HAMAP:MF_01320_A | InterPro:NA-bd_OB-fold | RefSeq:NP_179393.1 | ProteinID:OAP09487.1 | UniProt:P46286 | PFAM:PF00181 |
| PFAM:PF03947 | PIRSF:PIRSF002158 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0025281 | ScanProsite:PS00467 | PANTHER:PTHR13691 | PANTHER:PTHR13691:SF33 | InterPro:Rbsml_prot_L2_RNA-bd_dom | InterPro:Rib_L2_dom2 |
| InterPro:Ribosomal_L2 | InterPro:Ribosomal_L2_C | InterPro:Ribosomal_L2_CS | InterPro:Ribosomal_L2_arc | InterPro:Ribosomal_L2_dom3 | SMART:SM01382 |
| SMART:SM01383 | SUPFAM:SSF50104 | SUPFAM:SSF50249 | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI00000014E1 | EMBL:X86765 |
Description
RPL8AEMB2296 [Source:UniProtKB/TrEMBL;Acc:A0A178VSS0]
Coordinates
chr2:+:7837067..7838476
Molecular Weight (calculated)
27860.8 Da
IEP (calculated)
11.525
GRAVY (calculated)
-0.469
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDFGERNGY LKGVVTEIIH DPGRGAPLAR VTFRHPFRFK KQKELFVAAE GMYTGQFLYC GKKATLVVGN
101: VLPLRSIPEG AVVCNVEHHV GDRGVLARAS GDYAIVIAHN PDSDTTRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNSWPKVR
201: GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA AASAAKAD
101: VLPLRSIPEG AVVCNVEHHV GDRGVLARAS GDYAIVIAHN PDSDTTRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNSWPKVR
201: GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA AASAAKAD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.