Factsheet for TraesCS5D01G008500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G298800.1	Wheat	plastid	77.85	92.8
TraesCS2D01G264000.1	Wheat	cytosol, mitochondrion	89.26	80.61
TraesCS6D01G175200.1	Wheat	cytosol, mitochondrion	87.92	79.39
TraesCS3D01G499500.1	Wheat	cytosol, mitochondrion	87.92	79.39
TraesCS5D01G458000.1	Wheat	cytosol	86.58	78.18
TraesCS3D01G469700.1	Wheat	cytosol, mitochondrion	83.89	75.76
TraesCS7D01G254600.1	Wheat	mitochondrion	67.11	74.07
TraesCS1D01G179700.1	Wheat	plastid	74.5	74.0
TraesCS4D01G043800.1	Wheat	plastid	75.17	72.73
TraesCS4D01G362200.1	Wheat	cytosol	10.07	21.43
TraesCS4D01G296600.1	Wheat	mitochondrion	34.9	19.92
TraesCS1D01G010400.1	Wheat	mitochondrion	40.94	19.12
TraesCS5D01G095400.1	Wheat	mitochondrion	32.89	18.77
TraesCS4D01G123700.1	Wheat	golgi	32.89	18.77
Bra036831.1-P	Field mustard	cytosol	22.15	15.42
VIT_12s0134g00130.t01	Wine grape	cytosol, mitochondrion	0.67	1.18
TraesCS4D01G043700.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G008400.1	Wheat	cytosol	0.0	0.0
HORVU0Hr1G034600.1	Barley	cytosol	0.0	0.0
TraesCS5D01G219800.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G345600.1	Wheat	cytosol	0.0	0.0
HORVU0Hr1G034040.1	Barley	cytosol	0.0	0.0
TraesCS6D01G080000.1	Wheat	cytosol	0.0	0.0
HORVU0Hr1G033410.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G028650.1	Barley	cytosol	0.0	0.0
TraesCS7D01G254900.1	Wheat	cytosol	0.0	0.0
HORVU0Hr1G026900.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.30.30.30	MapMan:35.1	Gene3D:4.10.950.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR014722
InterPro:IPR014726	PFAM:PF03947	ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF25	InterPro:Rib_L2_dom2
InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_CS	InterPro:Ribosomal_L2_dom3	SMART:SM01382	SUPFAM:SSF50104
EnsemblPlantsGene:TraesCS5D01G008500	EnsemblPlants:TraesCS5D01G008500.1	InterPro:Translation_prot_SH3-like_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:6188132..6188581

Molecular Weight (calculated)

16000.7 Da

IEP (calculated)

11.339

GRAVY (calculated)

-0.348

Length

149 amino acids

Sequence
(BLAST)

001: MLWKKLVQFG KGFFERKEES TSTDMPLGTA MHNIEITRGR GGKLARAAGA VAKLIAKEGK SATLRLPFGE VRLVSQNCLA TVGQVGNVGV NQKSLGRAGS
101: KYWLGKRPVV RGVVMNPVDH PHGGGEGKAL IGRKKTHNPL GLSCAWKKN

Best Arabidopsis Sequence Match ( ATCG00830.1 )
(BLAST)

001: MAIHLYKTST PSTRNGAVDS QVKSNPRNNL ICGQHHCGKG RNARGIITAR HRGGGHKRLY RKIDFRRNAK DIYGRIVTIE YDPNRNAYIC LIHYGDGEKR
101: YILHPRGAII GDTIVSGTEV PIKMGNALPL TDMPLGTAIH NIEITLGRGG QLARAAGAVA KLIAKEGKSA TLKLPSGEVR LISKNCSATV GQVGNVGVNQ
201: KSLGRAGSKC WLGKRPVVRG VVMNPVDHPH GGGEGRAPIG RKKPVTPWGY PALGRRTRKR KKYSETLILR RRSK

Arabidopsis Description

rpl2-B50S ribosomal protein L2, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W512]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.