Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G026230.1 | Barley | cytosol | 100.0 | 100.0 |
| TraesCS5D01G345600.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS6D01G080000.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G034600.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G034040.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G033410.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G028650.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G026950.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G032910.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G026770.1 | Barley | cytosol | 100.0 | 100.0 |
| TraesCS5D01G008400.1 | Wheat | cytosol | 98.59 | 98.59 |
| TraesCS4D01G043700.1 | Wheat | cytosol | 98.59 | 98.59 |
| TraesCS5D01G219800.1 | Wheat | cytosol | 98.59 | 98.59 |
| HORVU0Hr1G026890.2 | Barley | mitochondrion | 2.82 | 1.32 |
| HORVU4Hr1G077020.1 | Barley | mitochondrion | 1.41 | 0.38 |
| HORVU5Hr1G021730.2 | Barley | cytosol | 1.41 | 0.36 |
| VIT_12s0134g00130.t01 | Wine grape | cytosol, mitochondrion | 0.0 | 0.0 |
| TraesCS5D01G008500.1 | Wheat | cytosol, mitochondrion | 0.0 | 0.0 |
| Bra036831.1-P | Field mustard | cytosol | 0.0 | 0.0 |
| TraesCS4D01G043800.1 | Wheat | plastid | 0.0 | 0.0 |
| HORVU7Hr1G091650.3 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU5Hr1G064940.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU5Hr1G064920.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU5Hr1G032290.1 | Barley | cytosol, plastid | 0.0 | 0.0 |
| HORVU5Hr1G005390.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU5Hr1G004660.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU4Hr1G013620.1 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU3Hr1G074880.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU3Hr1G048800.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU3Hr1G001530.1 | Barley | plastid | 0.0 | 0.0 |
| HORVU2Hr1G121550.1 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU2Hr1G070550.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU2Hr1G062100.1 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU1Hr1G002310.1 | Barley | mitochondrion, plastid | 0.0 | 0.0 |
| HORVU0Hr1G036520.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU0Hr1G034970.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU0Hr1G034930.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.860.10 | MapMan:35.1 | ProteinID:AGP50795.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0019538 | GO:GO:0019843 |
| GO:GO:0030529 | EnsemblPlantsGene:HORVU0Hr1G026900 | EnsemblPlants:HORVU0Hr1G026900.1 | InterPro:IPR023575 | HAMAP:MF_00531 | PFAM:PF00203 |
| PIRSF:PIRSF002144 | PRINTS:PR00975 | ScanProsite:PS00323 | PANTHER:PTHR11880 | PANTHER:PTHR11880:SF9 | InterPro:Ribosomal_S19 |
| InterPro:Ribosomal_S19_CS | InterPro:Ribosomal_S19_SF | InterPro:Ribosomal_S19_bac-type | UniProt:S4Z202 | SUPFAM:SSF54570 | TIGRFAMs:TIGR01050 |
| UniParc:UPI0001D42C86 | : | : | : | : | : |
Description
30S ribosomal protein S19, chloroplastic [Source:UniProtKB/TrEMBL;Acc:S4Z202]
Coordinates
chrchrUn:-:142936215..142936430
Molecular Weight (calculated)
8194.9 Da
IEP (calculated)
10.622
GRAVY (calculated)
-0.658
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MKEEKETIVT WSRASSILPT MVGHTIAIHN GKEHIPIYIT NPMVGRKLGE FVPTRHFTSY ENARKDTKSR R
1: VTRSLKKNPF VAKHLLRKIE KLNTKAEKEI IITWSRASTI IPTMIGHTIA IHNGREHLPV YIIDLMVGHK LGEFSPTINF RGHAKNDNRS RR
Arabidopsis Description
RPS19ribosomal protein S19 [Source:TAIR;Acc:ATCG00820]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.