Factsheet for HORVU5Hr1G032290.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g007630.2.1	Tomato	nucleus	92.48	34.94
HORVU2Hr1G121550.1	Barley	mitochondrion	9.02	14.12
HORVU3Hr1G001530.1	Barley	plastid	27.07	10.03
HORVU1Hr1G002310.1	Barley	mitochondrion, plastid	27.07	10.0
HORVU4Hr1G077020.1	Barley	mitochondrion	15.79	8.05
HORVU0Hr1G034970.1	Barley	cytosol, mitochondrion	9.02	7.41
HORVU0Hr1G034930.1	Barley	cytosol, mitochondrion	9.02	7.27
HORVU3Hr1G048800.1	Barley	cytosol, mitochondrion	9.02	7.27
HORVU0Hr1G036520.1	Barley	cytosol, mitochondrion	9.02	7.27
HORVU5Hr1G004660.1	Barley	cytosol, mitochondrion	9.02	7.27
HORVU5Hr1G064920.1	Barley	cytosol, mitochondrion	9.02	7.27
HORVU7Hr1G091650.3	Barley	cytosol, mitochondrion	9.02	7.27
HORVU5Hr1G021730.2	Barley	cytosol	15.04	7.12
HORVU2Hr1G070550.1	Barley	cytosol, mitochondrion	8.27	6.67
HORVU3Hr1G074880.1	Barley	cytosol	4.51	6.32
KRG93952	Soybean	mitochondrion	2.26	2.78
HORVU2Hr1G062100.1	Barley	mitochondrion	1.5	2.11
HORVU4Hr1G013620.1	Barley	mitochondrion	0.75	1.45
HORVU0Hr1G026890.2	Barley	mitochondrion	1.5	1.32
Solyc10g018610.1.1	Tomato	plastid	1.5	1.2
HORVU0Hr1G034600.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G034040.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G033410.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G005390.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G032910.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G028650.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G064940.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026950.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026900.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026770.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026230.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.40.50.140	MapMan:35.1	UniProt:A0A287QT18	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G032290
EnsemblPlants:HORVU5Hr1G032290.1	InterPro:NA-bd_OB-fold	PFAM:PF00181	PANTHER:PTHR13691	PANTHER:PTHR13691:SF5	InterPro:Rbsml_prot_L2_RNA-bd_dom
InterPro:Ribosomal_L2	SMART:SM01383	SUPFAM:SSF50249	UniParc:UPI000B47D2BD	:	:

Description

No Description!

Coordinates

chrchr5H:+:210586964..210588461

Molecular Weight (calculated)

14878.9 Da

IEP (calculated)

10.246

GRAVY (calculated)

-0.584

Length

133 amino acids

Sequence
(BLAST)

001: MAIHLYKTST SSTRNGAVDS QVKYNPRNNL IYGQHHCGKG RNSRGIITAG HRGGGHKRLY RKIDFQRNEK DIYGRIVTIE YDPNRNAYIC LIHYGDGEKR
101: YILHPRGAII GDTIVSGTEV PIKMGNALPL SAV

Best Arabidopsis Sequence Match ( ATCG00830.1 )
(BLAST)

001: MAIHLYKTST PSTRNGAVDS QVKSNPRNNL ICGQHHCGKG RNARGIITAR HRGGGHKRLY RKIDFRRNAK DIYGRIVTIE YDPNRNAYIC LIHYGDGEKR
101: YILHPRGAII GDTIVSGTEV PIKMGNALPL TDMPLGTAIH NIEITLGRGG QLARAAGAVA KLIAKEGKSA TLKLPSGEVR LISKNCSATV GQVGNVGVNQ
201: KSLGRAGSKC WLGKRPVVRG VVMNPVDHPH GGGEGRAPIG RKKPVTPWGY PALGRRTRKR KKYSETLILR RRSK

Arabidopsis Description

rpl2-B50S ribosomal protein L2, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W512]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.