Factsheet for HORVU3Hr1G001530.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G395800.1	Wheat	cytosol	39.28	99.3
TraesCS7A01G503700.1	Wheat	mitochondrion	86.91	97.81
TraesCS1D01G010400.1	Wheat	mitochondrion	86.35	97.18
TraesCS1B01G038000.1	Wheat	mitochondrion	86.07	96.26
TraesCS1B01G414400.1	Wheat	mitochondrion	85.52	95.64
HORVU1Hr1G002310.1	Barley	mitochondrion, plastid	89.42	89.17
KRH38753	Soybean	mitochondrion	30.08	55.38
KRH09254	Soybean	nucleus	29.8	54.87
VIT_05s0094g01100.t01	Wine grape	mitochondrion	30.64	53.92
Solyc08g075410.2.1	Tomato	mitochondrion	29.25	51.98
GSMUA_AchrUn_...	Banana	mitochondrion	57.38	47.03
HORVU2Hr1G062100.1	Barley	mitochondrion	12.26	46.32
AT2G44065.3	Thale cress	mitochondrion	27.3	45.79
CDX83442	Canola	mitochondrion, plastid	27.02	44.91
CDX95586	Canola	mitochondrion, plastid	27.02	44.7
CDY17889	Canola	mitochondrion, plastid	26.74	44.65
CDX79785	Canola	mitochondrion, plastid	26.46	44.39
Bra004801.1-P	Field mustard	mitochondrion	26.18	43.93
EER90317	Sorghum	mitochondrion	52.65	43.55
Zm00001d050496_P001	Maize	mitochondrion	52.37	41.96
HORVU0Hr1G026890.2	Barley	mitochondrion	16.99	40.13
HORVU7Hr1G091650.3	Barley	cytosol, mitochondrion	18.38	40.0
HORVU3Hr1G048800.1	Barley	cytosol, mitochondrion	18.38	40.0
HORVU2Hr1G070550.1	Barley	cytosol, mitochondrion	18.38	40.0
HORVU0Hr1G036520.1	Barley	cytosol, mitochondrion	18.38	40.0
HORVU0Hr1G034930.1	Barley	cytosol, mitochondrion	18.38	40.0
HORVU5Hr1G004660.1	Barley	cytosol, mitochondrion	18.11	39.39
HORVU5Hr1G064920.1	Barley	cytosol, mitochondrion	17.55	38.18
OQU80748	Sorghum	endoplasmic reticulum, extracellular	38.72	38.08
HORVU0Hr1G034970.1	Barley	cytosol, mitochondrion	16.71	37.04
CDY30453	Canola	mitochondrion	16.43	35.98
HORVU3Hr1G074880.1	Barley	cytosol	8.91	33.68
HORVU4Hr1G013620.1	Barley	mitochondrion	6.13	31.88
HORVU2Hr1G121550.1	Barley	mitochondrion	6.96	29.41
HORVU4Hr1G077020.1	Barley	mitochondrion	20.61	28.35
HORVU5Hr1G032290.1	Barley	cytosol, plastid	10.03	27.07
HORVU5Hr1G021730.2	Barley	cytosol	20.33	25.98
CDY23415	Canola	plastid	18.94	25.56
HORVU5Hr1G064940.1	Barley	cytosol	4.74	23.94
HORVU5Hr1G005390.1	Barley	cytosol	4.74	23.94
HORVU0Hr1G028650.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026950.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G034040.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026900.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026770.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026230.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G032910.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G033410.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G034600.1	Barley	cytosol	0.0	0.0

Protein Annotations

MapMan:17.7.1.1.2	MapMan:17.7.1.1.3	Gene3D:2.30.30.30	Gene3D:2.40.50.140	Gene3D:4.10.950.10	UniProt:A0A287JWJ4
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0003824	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G001530	EnsemblPlants:HORVU3Hr1G001530.1	InterPro:IPR014722	InterPro:IPR014726
InterPro:NA-bd_OB-fold	PFAM:PF00181	PFAM:PF03947	ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF34
InterPro:Rbsml_prot_L2_RNA-bd_dom	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_CS	InterPro:Ribosomal_L2_bac/org-type
InterPro:Ribosomal_L2_dom3	SMART:SM01382	SMART:SM01383	SUPFAM:SSF50104	SUPFAM:SSF50249	TIGRFAMs:TIGR01171
InterPro:Translation_prot_SH3-like_sf	UniParc:UPI000B479729	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:3532377..3534282

Molecular Weight (calculated)

38867.8 Da

IEP (calculated)

11.428

GRAVY (calculated)

-0.566

Length

359 amino acids

Sequence
(BLAST)

001: HDSTNLRPDP FPLPPLSPST PSLRRRLTPR AAAVRLPSVA QMHKFKTLAK ALTGKTVTAG RNSSGRITSF HRGGGSKRSL RDIDLKRNTC SVGIVERIEY
101: DPNRSSRIAL LRWIEGVGQK DPAYKAERAP VNYIIASHQM EPGSMVVNSD SSKPSTTGSL MRPAHNADSF LRFQELFRKA SQGEEGTDGQ AKDAAATTAA
201: PLMPADLLDL NSKVGNCMPL SDIRMGTWVH SIELRHGQGA KLVRAAGAYA KVVKESATQC LVRLPSGVEK LIDSRCRATI GIVSNPTHGA RKLRKAGHSR
301: WLGRRPVVRG VAMNPVDHPH GGGEGRTKGG RPSVSPWGKP TKAGYRTVPK KPKAQLSRD

Best Arabidopsis Sequence Match ( AT2G44065.3 )
(BLAST)

001: MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE
101: PAKGKCLIKL PSGDTKWINA KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG RTSVSPWGKP CKGGYKSASV
201: KKKKKRLAEA AAKM

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8VZU4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.