CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09254	Soybean	nucleus	97.95	97.95
VIT_05s0094g01100.t01	Wine grape	mitochondrion	73.85	70.59
TraesCS1B01G395800.1	Wheat	cytosol	51.28	70.42
Solyc08g075410.2.1	Tomato	mitochondrion	68.21	65.84
CDX83442	Canola	mitochondrion, plastid	62.05	56.02
CDY17889	Canola	mitochondrion, plastid	61.54	55.81
CDX95586	Canola	mitochondrion, plastid	62.05	55.76
CDX79785	Canola	mitochondrion, plastid	61.03	55.61
AT2G44065.3	Thale cress	mitochondrion	61.03	55.61
Bra004801.1-P	Field mustard	mitochondrion	60.51	55.14
CDY30453	Canola	mitochondrion	38.46	45.73
KRG93952	Soybean	mitochondrion	18.97	34.26
TraesCS7A01G503700.1	Wheat	mitochondrion	55.38	33.86
TraesCS1D01G010400.1	Wheat	mitochondrion	55.38	33.86
TraesCS1B01G038000.1	Wheat	mitochondrion	55.38	33.64
TraesCS1B01G414400.1	Wheat	mitochondrion	54.36	33.02
HORVU1Hr1G002310.1	Barley	mitochondrion, plastid	55.9	30.28
HORVU3Hr1G001530.1	Barley	plastid	55.38	30.08
CDY23415	Canola	plastid	39.49	28.95
OQU80748	Sorghum	endoplasmic reticulum, extracellular	51.79	27.67
EER90317	Sorghum	mitochondrion	55.38	24.88
Zm00001d050496_P001	Maize	mitochondrion	56.92	24.78
GSMUA_AchrUn_...	Banana	mitochondrion	54.36	24.2
KRH69797	Soybean	mitochondrion	27.69	20.77
KRH08094	Soybean	nucleus	27.69	20.77
KRH28784	Soybean	mitochondrion	27.69	20.69
KRH76671	Soybean	mitochondrion	27.18	20.31

Protein Annotations

EntrezGene:100527286	MapMan:17.7.1.1.3	Gene3D:2.30.30.30	Gene3D:4.10.950.10	EMBL:ACUP02005872	EnsemblPlantsGene:GLYMA_09G155900
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0003824	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005762	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015934	GO:GO:0016740	GO:GO:0019538	GO:GO:0032543	UniProt:I1L3M3
InterPro:IPR014722	InterPro:IPR014726	EnsemblPlants:KRH38753	ProteinID:KRH38753	ProteinID:KRH38753.1	ProteinID:KRH38754.1
PFAM:PF03947	ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF34	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L2
InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_CS	InterPro:Ribosomal_L2_bac/org-type	InterPro:Ribosomal_L2_dom3	SMART:SM01382	SUPFAM:SSF50104
TIGRFAMs:TIGR01171	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0001BA62D5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:37913388..37917508

Molecular Weight (calculated)

21009.5 Da

IEP (calculated)

11.819

GRAVY (calculated)

-0.518

Length

195 amino acids

Sequence
(BLAST)

001: MAVSLWRSRT ASSALNLFNN TLRCFSSEAT NSSPHSTRES MMYSDINSRI GSCMPLSAMR IGTIIHNIEL NPGQGGKLVR AAGTSAKILK EPTSAYCLIQ
101: LPSGVKKLID SRCRATVGVV SNPSHGDRKL RKAGHSRWLG RRPVVRGVAM NPVDHPHGGG EGKSKSGGRF GRGSLTPWGK PTKSGYKTGP LKRKR

Best Arabidopsis Sequence Match ( AT2G44065.3 )
(BLAST)

001: MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE
101: PAKGKCLIKL PSGDTKWINA KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG RTSVSPWGKP CKGGYKSASV
201: KKKKKRLAEA AAKM

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8VZU4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.