CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G062100.1	Barley	mitochondrion	53.7	61.05
TraesCS7D01G254600.1	Wheat	mitochondrion	67.59	54.07
TraesCS1D01G298800.1	Wheat	plastid	62.04	53.6
TraesCS1D01G179700.1	Wheat	plastid	67.59	48.67
TraesCS3A01G431300.1	Wheat	cytosol, mitochondrion	69.44	48.39
HORVU0Hr1G026890.2	Barley	mitochondrion	66.67	47.37
HORVU3Hr1G048800.1	Barley	cytosol, mitochondrion	72.22	47.27
TraesCS3D01G499500.1	Wheat	cytosol, mitochondrion	72.22	47.27
HORVU7Hr1G091650.3	Barley	cytosol, mitochondrion	72.22	47.27
TraesCS2A01G241900.1	Wheat	cytosol, mitochondrion	72.22	47.27
HORVU2Hr1G070550.1	Barley	cytosol, mitochondrion	72.22	47.27
TraesCS3B01G469800.1	Wheat	cytosol, mitochondrion	72.22	47.27
Bra040982.1-P	Field mustard	cytosol, mitochondrion	72.22	47.27
HORVU0Hr1G034930.1	Barley	cytosol, mitochondrion	72.22	47.27
TraesCS2D01G264000.1	Wheat	cytosol, mitochondrion	72.22	47.27
HORVU0Hr1G036520.1	Barley	cytosol, mitochondrion	72.22	47.27
TraesCS5A01G421200.1	Wheat	cytosol, plastid	62.96	47.22
HORVU5Hr1G064920.1	Barley	cytosol, mitochondrion	71.3	46.67
TraesCSU01G255700.1	Wheat	cytosol, mitochondrion	71.3	46.67
GRMZM5G818111_P01	Maize	cytosol	71.3	46.67
TraesCSU01G246600.1	Wheat	cytosol, mitochondrion	71.3	46.67
HORVU5Hr1G004660.1	Barley	cytosol, mitochondrion	71.3	46.67
TraesCS2B01G330900.1	Wheat	cytosol	66.67	46.45
TraesCS6D01G175200.1	Wheat	cytosol, mitochondrion	70.37	46.06
TraesCS5D01G458000.1	Wheat	cytosol	70.37	46.06
TraesCS4A01G153600.1	Wheat	cytosol, mitochondrion	70.37	46.06
HORVU0Hr1G034970.1	Barley	cytosol, mitochondrion	68.52	45.68
TraesCS6A01G192000.1	Wheat	cytosol	69.44	45.45
TraesCS3D01G469700.1	Wheat	cytosol, mitochondrion	64.81	42.42
TraesCS5A01G436700.1	Wheat	mitochondrion	55.56	41.96
HORVU4Hr1G013620.1	Barley	mitochondrion	25.0	39.13
Solyc10g018610.1.1	Tomato	plastid	53.7	34.94
HORVU2Hr1G121550.1	Barley	mitochondrion	26.85	34.12
HORVU3Hr1G074880.1	Barley	cytosol	27.78	31.58
GRMZM5G827951_P01	Maize	plastid	71.3	31.17
ATCG00830.1	Thale cress	cytosol, plastid	71.3	28.1
ATCG01310.1	Thale cress	cytosol, plastid	71.3	28.1
VIT_17s0000g06990.t01	Wine grape	nucleus	43.52	27.98
CAA33928	Rice	plastid	69.44	27.47
CAA33924	Rice	cytosol	69.44	27.47
KRH38753	Soybean	mitochondrion	34.26	18.97
KRH09254	Soybean	nucleus	34.26	18.97
TraesCS4D01G362200.1	Wheat	cytosol	9.26	14.29
HORVU5Hr1G064940.1	Barley	cytosol	9.26	14.08
HORVU5Hr1G005390.1	Barley	cytosol	9.26	14.08
KRH69797	Soybean	mitochondrion	30.56	12.69
KRH08094	Soybean	nucleus	30.56	12.69
KRH28784	Soybean	mitochondrion	30.56	12.64
KRH76671	Soybean	mitochondrion	29.63	12.26
HORVU5Hr1G032290.1	Barley	cytosol, plastid	2.78	2.26
TraesCSU01G255800.1	Wheat	cytosol	0.0	0.0

Protein Annotations

MapMan:35.1	Gene3D:4.10.950.10	EMBL:ACUP02011657	EnsemblPlantsGene:GLYMA_19G051900	GO:GO:0002181	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0003824	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0015934	GO:GO:0016740	GO:GO:0019538	GO:GO:0022625	GO:GO:0030529
InterPro:IPR014726	UniProt:K7MWP8	EnsemblPlants:KRG93952	ProteinID:KRG93952	ProteinID:KRG93952.1	PFAM:PF03947
ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF25	InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_CS
InterPro:Ribosomal_L2_dom3	SMART:SM01382	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0002960F48	:

Description

hypothetical protein

Coordinates

chr19:+:8468452..8468778

Molecular Weight (calculated)

11699.6 Da

IEP (calculated)

11.789

GRAVY (calculated)

-0.331

Length

108 amino acids

Sequence
(BLAST)

001: MLCKKLVQFG KRFLATVGGA IAKLITKEGK SATLKLPSGE VRLGNVGVNQ KNLGRARSKC WLGKHPVVRG VVMNPVDHPH EGGEGRAPIG RKKTRNSLGF
101: SSTWKKII

Best Arabidopsis Sequence Match ( ATCG00830.1 )
(BLAST)

001: MAIHLYKTST PSTRNGAVDS QVKSNPRNNL ICGQHHCGKG RNARGIITAR HRGGGHKRLY RKIDFRRNAK DIYGRIVTIE YDPNRNAYIC LIHYGDGEKR
101: YILHPRGAII GDTIVSGTEV PIKMGNALPL TDMPLGTAIH NIEITLGRGG QLARAAGAVA KLIAKEGKSA TLKLPSGEVR LISKNCSATV GQVGNVGVNQ
201: KSLGRAGSKC WLGKRPVVRG VVMNPVDHPH GGGEGRAPIG RKKPVTPWGY PALGRRTRKR KKYSETLILR RRSK

Arabidopsis Description

rpl2-B50S ribosomal protein L2, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W512]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.