Factsheet for TraesCS5A01G436700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G121550.1	Barley	mitochondrion	52.45	88.24
Bra040982.1-P	Field mustard	cytosol, mitochondrion	96.5	83.64
TraesCS2A01G241900.1	Wheat	cytosol, mitochondrion	95.8	83.03
HORVU5Hr1G064920.1	Barley	cytosol, mitochondrion	95.1	82.42
GRMZM5G818111_P01	Maize	cytosol	94.41	81.82
TraesCS3A01G431300.1	Wheat	cytosol, mitochondrion	88.11	81.29
TraesCS6A01G192000.1	Wheat	cytosol	93.71	81.21
TraesCS4A01G153600.1	Wheat	cytosol, mitochondrion	87.41	75.76
HORVU3Hr1G074880.1	Barley	cytosol	48.95	73.68
TraesCS5A01G421200.1	Wheat	cytosol, plastid	73.43	72.92
CDX99954	Canola	cytosol	70.63	71.13
CDY28606	Canola	cytosol	74.13	56.68
CDX95206	Canola	cytosol	74.13	56.68
CDX91813	Canola	nucleus	72.73	55.62
KRG93952	Soybean	mitochondrion	41.96	55.56
GRMZM5G827951_P01	Maize	plastid	94.41	54.66
ATCG00830.1	Thale cress	cytosol, plastid	77.62	40.51
ATCG01310.1	Thale cress	cytosol, plastid	77.62	40.51
CDY21179	Canola	plastid	74.13	39.85
Solyc10g018610.1.1	Tomato	plastid	41.26	35.54
VIT_17s0000g06990.t01	Wine grape	nucleus	39.16	33.33
Solyc01g007630.2.1	Tomato	nucleus	75.52	30.68
TraesCS4A01G007200.1	Wheat	mitochondrion	27.97	15.33
TraesCS4A01G189200.1	Wheat	mitochondrion	25.87	14.18
TraesCS5A01G082800.1	Wheat	mitochondrion	25.87	14.18
TraesCS7A01G503700.1	Wheat	mitochondrion	30.77	13.79
TraesCS5A01G274300.1	Wheat	mitochondrion	16.08	12.92
TraesCS4A01G154700.1	Wheat	plastid	4.2	4.51
TraesCS1A01G011700.1	Wheat	extracellular	1.4	1.18

Protein Annotations

Gene3D:2.30.30.30	MapMan:35.1	Gene3D:4.10.950.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR014722
InterPro:IPR014726	PFAM:PF03947	PANTHER:PTHR13691	PANTHER:PTHR13691:SF25	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L2
InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_dom3	SMART:SM01382	SUPFAM:SSF50104	EnsemblPlantsGene:TraesCS5A01G436700	EnsemblPlants:TraesCS5A01G436700.1
InterPro:Translation_prot_SH3-like_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:619265516..619266012

Molecular Weight (calculated)

15844.6 Da

IEP (calculated)

11.924

GRAVY (calculated)

-0.554

Length

143 amino acids

Sequence
(BLAST)

001: MLWKKLVQFG KGFFERKEES TSTDMPLGTA MHNIEITRGR GGQLARAAGA IAKLIAKEGK SATLRLPSGE VRLVSQNCLA IVRQVGNVGV NQKNLGRAGS
101: KCWLGKAPIG RKKPTTPWGY PALGRRTRKR KKYSDSFILR HRK

Best Arabidopsis Sequence Match ( ATCG00830.1 )
(BLAST)

001: MAIHLYKTST PSTRNGAVDS QVKSNPRNNL ICGQHHCGKG RNARGIITAR HRGGGHKRLY RKIDFRRNAK DIYGRIVTIE YDPNRNAYIC LIHYGDGEKR
101: YILHPRGAII GDTIVSGTEV PIKMGNALPL TDMPLGTAIH NIEITLGRGG QLARAAGAVA KLIAKEGKSA TLKLPSGEVR LISKNCSATV GQVGNVGVNQ
201: KSLGRAGSKC WLGKRPVVRG VVMNPVDHPH GGGEGRAPIG RKKPVTPWGY PALGRRTRKR KKYSETLILR RRSK

Arabidopsis Description

rpl2-B50S ribosomal protein L2, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W512]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.