Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G254600.1 | Wheat | mitochondrion | 83.1 | 87.41 |
| TraesCS1D01G179700.1 | Wheat | plastid | 89.44 | 84.67 |
| HORVU2Hr1G062100.1 | Barley | mitochondrion | 56.34 | 84.21 |
| TraesCS1D01G298800.1 | Wheat | plastid | 70.42 | 80.0 |
| TraesCS2B01G330900.1 | Wheat | cytosol | 87.32 | 80.0 |
| TraesCS5A01G421200.1 | Wheat | cytosol, plastid | 80.99 | 79.86 |
| HORVU2Hr1G070550.1 | Barley | cytosol, mitochondrion | 90.85 | 78.18 |
| HORVU0Hr1G026890.2 | Barley | mitochondrion | 83.1 | 77.63 |
| Bra040982.1-P | Field mustard | cytosol, mitochondrion | 90.14 | 77.58 |
| HORVU0Hr1G036520.1 | Barley | cytosol, mitochondrion | 90.14 | 77.58 |
| HORVU0Hr1G034930.1 | Barley | cytosol, mitochondrion | 90.14 | 77.58 |
| GRMZM5G818111_P01 | Maize | cytosol | 90.14 | 77.58 |
| HORVU3Hr1G048800.1 | Barley | cytosol, mitochondrion | 90.14 | 77.58 |
| HORVU7Hr1G091650.3 | Barley | cytosol, mitochondrion | 90.14 | 77.58 |
| TraesCS2D01G264000.1 | Wheat | cytosol, mitochondrion | 90.14 | 77.58 |
| TraesCS3B01G469800.1 | Wheat | cytosol, mitochondrion | 89.44 | 76.97 |
| TraesCS3D01G499500.1 | Wheat | cytosol, mitochondrion | 89.44 | 76.97 |
| TraesCSU01G255700.1 | Wheat | cytosol, mitochondrion | 89.44 | 76.97 |
| TraesCS6D01G175200.1 | Wheat | cytosol, mitochondrion | 88.73 | 76.36 |
| TraesCS2A01G241900.1 | Wheat | cytosol, mitochondrion | 88.73 | 76.36 |
| TraesCS5D01G458000.1 | Wheat | cytosol | 88.73 | 76.36 |
| TraesCSU01G246600.1 | Wheat | cytosol, mitochondrion | 88.73 | 76.36 |
| HORVU5Hr1G004660.1 | Barley | cytosol, mitochondrion | 88.73 | 76.36 |
| CDY28606 | Canola | cytosol | 100.0 | 75.94 |
| CDX95206 | Canola | cytosol | 100.0 | 75.94 |
| TraesCS3A01G431300.1 | Wheat | cytosol, mitochondrion | 82.39 | 75.48 |
| HORVU5Hr1G064920.1 | Barley | cytosol, mitochondrion | 87.32 | 75.15 |
| TraesCS6A01G192000.1 | Wheat | cytosol | 86.62 | 74.55 |
| CDX91813 | Canola | nucleus | 97.18 | 73.8 |
| TraesCS3D01G469700.1 | Wheat | cytosol, mitochondrion | 84.51 | 72.73 |
| TraesCS5A01G436700.1 | Wheat | mitochondrion | 71.13 | 70.63 |
| TraesCS4A01G153600.1 | Wheat | cytosol, mitochondrion | 81.69 | 70.3 |
| HORVU4Hr1G013620.1 | Barley | mitochondrion | 33.8 | 69.57 |
| HORVU0Hr1G034970.1 | Barley | cytosol, mitochondrion | 75.35 | 66.05 |
| HORVU3Hr1G074880.1 | Barley | cytosol | 38.73 | 57.89 |
| HORVU2Hr1G121550.1 | Barley | mitochondrion | 32.39 | 54.12 |
| CDY21179 | Canola | plastid | 99.3 | 53.01 |
| GRMZM5G827951_P01 | Maize | plastid | 90.14 | 51.82 |
| CAA33924 | Rice | cytosol | 90.85 | 47.25 |
| CAA33928 | Rice | plastid | 90.85 | 47.25 |
| VIT_17s0000g06990.t01 | Wine grape | nucleus | 54.93 | 46.43 |
| CDY17889 | Canola | mitochondrion, plastid | 46.48 | 30.7 |
| CDX83442 | Canola | mitochondrion, plastid | 46.48 | 30.56 |
| CDX75555 | Canola | cytosol | 38.03 | 30.51 |
| CDX95586 | Canola | mitochondrion, plastid | 46.48 | 30.41 |
| CDX79785 | Canola | mitochondrion, plastid | 45.77 | 30.37 |
| CDY38172 | Canola | nucleus | 11.27 | 29.09 |
| CDY29217 | Canola | cytosol | 26.76 | 24.68 |
| CDY25127 | Canola | cytosol | 18.31 | 23.85 |
| CDX90658 | Canola | extracellular | 38.73 | 21.24 |
| CDY47054 | Canola | extracellular | 38.03 | 20.93 |
| CDX69201 | Canola | cytosol, mitochondrion | 38.03 | 20.93 |
| CDX72577 | Canola | cytosol, mitochondrion | 38.03 | 20.93 |
| CDY24796 | Canola | mitochondrion | 38.03 | 20.93 |
| CDY30453 | Canola | mitochondrion | 23.24 | 20.12 |
| CDY29006 | Canola | mitochondrion | 36.62 | 20.08 |
| CDY35456 | Canola | cytosol, mitochondrion | 37.32 | 20.0 |
| CDY54550 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.61 | 16.89 |
| CDY20905 | Canola | mitochondrion | 26.76 | 16.17 |
| CDY25126 | Canola | mitochondrion | 26.76 | 16.17 |
| CDY38171 | Canola | mitochondrion | 26.76 | 16.17 |
| CDY23415 | Canola | plastid | 29.58 | 15.79 |
| CDY30333 | Canola | extracellular | 11.27 | 14.04 |
| CDX95204 | Canola | cytosol, plastid | 16.2 | 12.78 |
| TraesCSU01G255800.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.30.30 | MapMan:35.1 | Gene3D:4.10.950.10 | GO:A0A078EGP5 | EnsemblPlants:CDX99954 | ProteinID:CDX99954 |
| ProteinID:CDX99954.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0003824 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0015934 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00108816001 | InterPro:IPR014722 | InterPro:IPR014726 |
| PFAM:PF03947 | ScanProsite:PS00467 | PANTHER:PTHR13691 | PANTHER:PTHR13691:SF25 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L2 |
| InterPro:Ribosomal_L2_C | InterPro:Ribosomal_L2_CS | InterPro:Ribosomal_L2_bac/org-type | InterPro:Ribosomal_L2_dom3 | SMART:SM01382 | SUPFAM:SSF50104 |
| TIGRFAMs:TIGR01171 | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI0004EDC476 | SEG:seg | : | : |
Description
BnaC09g27510D
Coordinates
chrLK031915:-:997283..997711
Molecular Weight (calculated)
15091.7 Da
IEP (calculated)
12.069
GRAVY (calculated)
-0.427
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLGTAIHNI EITLGKGGQL ARAAGAVAKL IAKEGKSATL KLPSGEVRLI SKNCSATVGQ VGNVGVNQKS LGRAGSKCWL GKRPVVRGVV MNPVDHPHGG
101: GEGRAPIGRK KPVTPWGYPA LGRRTRKRKK YSETLILRRR SK
101: GEGRAPIGRK KPVTPWGYPA LGRRTRKRKK YSETLILRRR SK
001: MAIHLYKTST PSTRNGAVDS QVKSNPRNNL ICGQHHCGKG RNARGIITAR HRGGGHKRLY RKIDFRRNAK DIYGRIVTIE YDPNRNAYIC LIHYGDGEKR
101: YILHPRGAII GDTIVSGTEV PIKMGNALPL TDMPLGTAIH NIEITLGRGG QLARAAGAVA KLIAKEGKSA TLKLPSGEVR LISKNCSATV GQVGNVGVNQ
201: KSLGRAGSKC WLGKRPVVRG VVMNPVDHPH GGGEGRAPIG RKKPVTPWGY PALGRRTRKR KKYSETLILR RRSK
101: YILHPRGAII GDTIVSGTEV PIKMGNALPL TDMPLGTAIH NIEITLGRGG QLARAAGAVA KLIAKEGKSA TLKLPSGEVR LISKNCSATV GQVGNVGVNQ
201: KSLGRAGSKC WLGKRPVVRG VVMNPVDHPH GGGEGRAPIG RKKPVTPWGY PALGRRTRKR KKYSETLILR RRSK
Arabidopsis Description
rpl2-B50S ribosomal protein L2, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W512]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.