CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25127	Canola	cytosol	90.91	45.87
CDY30333	Canola	extracellular	74.55	35.96
Bra039912.1-P	Field mustard	cytosol	52.73	32.22
GSMUA_Achr11P...	Banana	cytosol	85.45	28.48
CDY54550	Canola	endoplasmic reticulum, extracellular, plasma membrane	74.55	27.7
CDY29217	Canola	cytosol	74.55	26.62
CDX75555	Canola	cytosol	81.82	25.42
PGSC0003DMT400056142	Potato	cytosol	89.09	18.85
PGSC0003DMT400064385	Potato	cytosol, mitochondrion	89.09	18.85
TraesCS4B01G128700.1	Wheat	mitochondrion	89.09	18.77
TraesCS4A01G189200.1	Wheat	mitochondrion	89.09	18.77
TraesCS5A01G082800.1	Wheat	mitochondrion	89.09	18.77
TraesCS5B01G088900.1	Wheat	mitochondrion	89.09	18.77
TraesCS4D01G123700.1	Wheat	golgi	89.09	18.77
TraesCS5D01G095400.1	Wheat	mitochondrion	89.09	18.77
Solyc12g005330.1.1	Tomato	nucleus	87.27	18.46
Solyc10g006580.2.1	Tomato	nucleus, plastid, unclear	87.27	18.46
Solyc07g063890.2.1	Tomato	extracellular, unclear	87.27	18.46
PGSC0003DMT400049608	Potato	cytosol, mitochondrion	87.27	18.46
Zm00001d019473_P001	Maize	plastid	87.27	18.46
VIT_04s0023g03210.t01	Wine grape	mitochondrion	87.27	18.46
KRH08094	Soybean	nucleus	87.27	18.46
KRH69797	Soybean	mitochondrion	87.27	18.46
KXG23748	Sorghum	mitochondrion	87.27	18.39
EER96269	Sorghum	mitochondrion	87.27	18.39
KRH28784	Soybean	mitochondrion	87.27	18.39
KRH76671	Soybean	mitochondrion	87.27	18.39
Os12t0567700-01	Rice	nucleus, plasma membrane	87.27	18.39
GSMUA_Achr11P...	Banana	mitochondrion	85.45	18.01
GSMUA_Achr5P18740_001	Banana	mitochondrion	85.45	18.01
Zm00001d030691_P001	Maize	mitochondrion	85.45	18.01
Zm00001d041568_P001	Maize	plasma membrane	85.45	18.01
CDY38171	Canola	mitochondrion	74.55	17.45
CDY20905	Canola	mitochondrion	74.55	17.45
CDY25126	Canola	mitochondrion	74.55	17.45
CDX69201	Canola	cytosol, mitochondrion	81.82	17.44
CDY47054	Canola	extracellular	81.82	17.44
CDX72577	Canola	cytosol, mitochondrion	81.82	17.44
CDY24796	Canola	mitochondrion	81.82	17.44
HORVU5Hr1G021730.2	Barley	cytosol	89.09	17.44
CDX90658	Canola	extracellular	80.0	16.99
CDY35456	Canola	cytosol, mitochondrion	81.82	16.98
HORVU4Hr1G077020.1	Barley	mitochondrion	74.55	15.71
TraesCS4A01G007200.1	Wheat	mitochondrion	74.55	15.71
EES18535	Sorghum	mitochondrion	72.73	15.38
OQU78327	Sorghum	mitochondrion	72.73	15.38
TraesCS4D01G296600.1	Wheat	mitochondrion	72.73	15.33
TraesCS4B01G297800.1	Wheat	mitochondrion	72.73	15.33
CDY29006	Canola	mitochondrion	70.91	15.06
CDX99954	Canola	cytosol	29.09	11.27
CDY28606	Canola	cytosol	29.09	8.56
CDX95206	Canola	cytosol	29.09	8.56
CDX91813	Canola	nucleus	29.09	8.56
CDX79785	Canola	mitochondrion, plastid	23.64	6.07
CDY17889	Canola	mitochondrion, plastid	23.64	6.05
CDX83442	Canola	mitochondrion, plastid	23.64	6.02
CDY21179	Canola	plastid	29.09	6.02
CDX95586	Canola	mitochondrion, plastid	23.64	5.99
CDY30453	Canola	mitochondrion	10.91	3.66
CDY23415	Canola	plastid	9.09	1.88
TraesCS7D01G254900.1	Wheat	cytosol	1.82	1.41
CDX95204	Canola	cytosol, plastid	0.0	0.0

Protein Annotations

MapMan:35.1	Gene3D:4.10.950.10	GO:A0A078HJY6	UniProt:A0A078HJY6	EnsemblPlants:CDY38172	ProteinID:CDY38172
ProteinID:CDY38172.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00065477001	InterPro:IPR014726	PANTHER:PTHR13691
PANTHER:PTHR13691:SF33	InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_dom3	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0004EEE755

Description

BnaA07g02110DBnaA07g02110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJY6]

Coordinates

chrLK032417:+:286883..287050

Molecular Weight (calculated)

5609.6 Da

IEP (calculated)

11.877

GRAVY (calculated)

-0.616

Length

55 amino acids

Sequence
(BLAST)

1: MNPVEDPNGG GNHQHIGHVS AVRRDAAPGQ KVGLIAARRT GRIRGQAAAS AAKAD

Best Arabidopsis Sequence Match ( AT4G36130.1 )
(BLAST)

001: MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDFGERNGY LKGVVTEIIH DPGRGAPLAR VAFRHPFRFK KQKELFVAAE GMYTGQFLYC GKKATLVVGN
101: VLPLRSIPEG AVICNVEHHV GDRGVFARAS GDYAIVIAHN PDNDTSRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNCWPKVR
201: GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGKKVGLIAA RRTGRLRGQA AALASKAD

Arabidopsis Description

RPL8C60S ribosomal protein L8-3 [Source:UniProtKB/Swiss-Prot;Acc:Q42064]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.