CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38172	Canola	nucleus	35.96	74.55
CDY54550	Canola	endoplasmic reticulum, extracellular, plasma membrane	85.96	66.22
CDY25127	Canola	cytosol	41.23	43.12
CDY29217	Canola	cytosol	51.75	38.31
GSMUA_Achr11P...	Banana	cytosol	50.0	34.55
CDX75555	Canola	cytosol	49.12	31.64
CDY38171	Canola	mitochondrion	53.51	25.96
CDY20905	Canola	mitochondrion	53.51	25.96
CDY25126	Canola	mitochondrion	53.51	25.96
Zm00001d019473_P001	Maize	plastid	56.14	24.62
EER96269	Sorghum	mitochondrion	56.14	24.52
KXG23748	Sorghum	mitochondrion	56.14	24.52
Os12t0567700-01	Rice	nucleus, plasma membrane	56.14	24.52
PGSC0003DMT400056142	Potato	cytosol	55.26	24.23
PGSC0003DMT400064385	Potato	cytosol, mitochondrion	55.26	24.23
Zm00001d041568_P001	Maize	plasma membrane	55.26	24.14
TraesCS4A01G189200.1	Wheat	mitochondrion	55.26	24.14
TraesCS4B01G128700.1	Wheat	mitochondrion	55.26	24.14
Zm00001d030691_P001	Maize	mitochondrion	55.26	24.14
TraesCS4D01G123700.1	Wheat	golgi	55.26	24.14
TraesCS5A01G082800.1	Wheat	mitochondrion	55.26	24.14
TraesCS5B01G088900.1	Wheat	mitochondrion	55.26	24.14
TraesCS5D01G095400.1	Wheat	mitochondrion	55.26	24.14
KRH08094	Soybean	nucleus	54.39	23.85
Solyc07g063890.2.1	Tomato	extracellular, unclear	54.39	23.85
KRH69797	Soybean	mitochondrion	54.39	23.85
VIT_04s0023g03210.t01	Wine grape	mitochondrion	54.39	23.85
PGSC0003DMT400049608	Potato	cytosol, mitochondrion	54.39	23.85
Solyc12g005330.1.1	Tomato	nucleus	54.39	23.85
Solyc10g006580.2.1	Tomato	nucleus, plastid, unclear	54.39	23.85
KRH76671	Soybean	mitochondrion	54.39	23.75
GSMUA_Achr11P...	Banana	mitochondrion	54.39	23.75
KRH28784	Soybean	mitochondrion	54.39	23.75
GSMUA_Achr5P18740_001	Banana	mitochondrion	54.39	23.75
CDX72577	Canola	cytosol, mitochondrion	50.88	22.48
CDX69201	Canola	cytosol, mitochondrion	50.88	22.48
CDY47054	Canola	extracellular	50.88	22.48
HORVU5Hr1G021730.2	Barley	cytosol	55.26	22.42
CDY24796	Canola	mitochondrion	50.0	22.09
TraesCS4A01G007200.1	Wheat	mitochondrion	50.0	21.84
CDX90658	Canola	extracellular	49.12	21.62
OQU78327	Sorghum	mitochondrion	49.12	21.54
EES18535	Sorghum	mitochondrion	49.12	21.54
CDY35456	Canola	cytosol, mitochondrion	50.0	21.51
TraesCS4B01G297800.1	Wheat	mitochondrion	49.12	21.46
HORVU4Hr1G077020.1	Barley	mitochondrion	49.12	21.46
TraesCS4D01G296600.1	Wheat	mitochondrion	49.12	21.46
CDY29006	Canola	mitochondrion	43.86	19.3
CDX99954	Canola	cytosol	14.04	11.27
CDY28606	Canola	cytosol	14.04	8.56
CDX95206	Canola	cytosol	14.04	8.56
CDX91813	Canola	nucleus	14.04	8.56
CDY30453	Canola	mitochondrion	12.28	8.54
CDX79785	Canola	mitochondrion, plastid	15.79	8.41
CDY17889	Canola	mitochondrion, plastid	15.79	8.37
CDX83442	Canola	mitochondrion, plastid	15.79	8.33
CDX95586	Canola	mitochondrion, plastid	15.79	8.29
CDY21179	Canola	plastid	14.04	6.02
CDY23415	Canola	plastid	9.65	4.14
TraesCS7D01G254900.1	Wheat	cytosol	0.88	1.41
CDX95204	Canola	cytosol, plastid	1.75	1.11

Protein Annotations

MapMan:35.2	Gene3D:4.10.950.10	GO:A0A078H0H2	UniProt:A0A078H0H2	EnsemblPlants:CDY30333	ProteinID:CDY30333
ProteinID:CDY30333.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00045011001	InterPro:IPR014726	PANTHER:PTHR13691
PANTHER:PTHR13691:SF35	InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_dom3	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0004EE89F1
SEG:seg	:	:	:	:	:

Description

BnaA09g09440DBnaA09g09440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0H2]

Coordinates

chrLK032252:-:281055..281944

Molecular Weight (calculated)

12199.0 Da

IEP (calculated)

11.347

GRAVY (calculated)

0.060

Length

114 amino acids

Sequence
(BLAST)

001: MSSRLELFLK ELLSAMSSIM SVIVVCSLEL LEITLSLSLT TRIMILLGSS CHLDRRRLSR AGNAYHNGGG NHQHIGHAST VRHDAPPGQK VGLIAARRTG
101: RLRGQAAASA AKAD

Best Arabidopsis Sequence Match ( AT4G36130.1 )
(BLAST)

001: MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDFGERNGY LKGVVTEIIH DPGRGAPLAR VAFRHPFRFK KQKELFVAAE GMYTGQFLYC GKKATLVVGN
101: VLPLRSIPEG AVICNVEHHV GDRGVFARAS GDYAIVIAHN PDNDTSRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNCWPKVR
201: GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGKKVGLIAA RRTGRLRGQA AALASKAD

Arabidopsis Description

RPL8C60S ribosomal protein L8-3 [Source:UniProtKB/Swiss-Prot;Acc:Q42064]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.