Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 3
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G154700.1 | Wheat | plastid | 5.92 | 7.52 |
| TraesCS7A01G503700.1 | Wheat | mitochondrion | 7.69 | 4.08 |
| TraesCS4A01G189200.1 | Wheat | mitochondrion | 5.92 | 3.83 |
| TraesCS5A01G082800.1 | Wheat | mitochondrion | 5.92 | 3.83 |
| TraesCS4A01G007200.1 | Wheat | mitochondrion | 4.73 | 3.07 |
| TraesCS5A01G436700.1 | Wheat | mitochondrion | 1.18 | 1.4 |
| TraesCS3A01G431300.1 | Wheat | cytosol, mitochondrion | 1.18 | 1.29 |
| TraesCS2A01G241900.1 | Wheat | cytosol, mitochondrion | 1.18 | 1.21 |
| TraesCS4A01G153600.1 | Wheat | cytosol, mitochondrion | 1.18 | 1.21 |
| TraesCS6A01G192000.1 | Wheat | cytosol | 1.18 | 1.21 |
| HORVU0Hr1G026230.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU0Hr1G026770.1 | Barley | cytosol | 0.0 | 0.0 |
| TraesCS5A01G274300.1 | Wheat | mitochondrion | 0.0 | 0.0 |
| TraesCS5A01G421200.1 | Wheat | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G011700.1 | EnsemblPlantsGene:TraesCS1A01G011700 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF279 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | TIGR:cd16454 | TMHMM:TMhelix | MapMan:19.2.2.1.5.3.3 | : |
Description
No Description!
Coordinates
chr1A:-:6773469..6773978
Molecular Weight (calculated)
17572.2 Da
IEP (calculated)
7.217
GRAVY (calculated)
0.207
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSPSPPGAS HGLFGSSGVG GFGYGLAVSV GILLVVSTVA FAVYLCCARA SSTPVADARG VPAPAPPRHD VELGGIDAAT LEAYPAVVYR EARKPASVEQ
101: QEACCAVCLE RYADSDMVRV LPDCGHLFRR GCVDPWLRQR PTCPVCRTSP LPSPVPTPLA EVTPLALAR
101: QEACCAVCLE RYADSDMVRV LPDCGHLFRR GCVDPWLRQR PTCPVCRTSP LPSPVPTPLA EVTPLALAR
001: MNATVVPPYS GHWLTNTDRM GGLAYGIGVS IGILMLITTI TLTSYYCTRS HISASPTTTP RTRRRQRESN GTLPPGQERF DFEDDESDTV VVEVLGLTEE
101: VIKGFPKLPY EEARVSYSLQ KESSTTSCCS ICLADYKKMD MIRVLPDCNH LFHDNCVDPW LRLHPTCPVC RTSPLPSPAM TPVADVVPFS RRPMMDI
101: VIKGFPKLPY EEARVSYSLQ KESSTTSCCS ICLADYKKMD MIRVLPDCNH LFHDNCVDPW LRLHPTCPVC RTSPLPSPAM TPVADVVPFS RRPMMDI
Arabidopsis Description
ATL71Putative RING-H2 finger protein ATL71 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG21]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.