Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G503700.1 | Wheat | mitochondrion | 26.32 | 10.97 |
| TraesCS4A01G189200.1 | Wheat | mitochondrion | 16.54 | 8.43 |
| TraesCS5A01G082800.1 | Wheat | mitochondrion | 16.54 | 8.43 |
| TraesCS4A01G007200.1 | Wheat | mitochondrion | 15.79 | 8.05 |
| TraesCS1A01G011700.1 | Wheat | extracellular | 7.52 | 5.92 |
| TraesCS5A01G421200.1 | Wheat | cytosol, plastid | 5.26 | 4.86 |
| TraesCS5A01G436700.1 | Wheat | mitochondrion | 4.51 | 4.2 |
| TraesCS3A01G431300.1 | Wheat | cytosol, mitochondrion | 4.51 | 3.87 |
| TraesCS2A01G241900.1 | Wheat | cytosol, mitochondrion | 4.51 | 3.64 |
| TraesCS4A01G153600.1 | Wheat | cytosol, mitochondrion | 4.51 | 3.64 |
| TraesCS6A01G192000.1 | Wheat | cytosol | 4.51 | 3.64 |
| TraesCS5A01G274300.1 | Wheat | mitochondrion | 3.76 | 2.81 |
Protein Annotations
| Gene3D:2.40.50.140 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:NA-bd_OB-fold | PFAM:PF00181 |
| PANTHER:PTHR13691 | PANTHER:PTHR13691:SF5 | InterPro:Rbsml_prot_L2_RNA-bd_dom | InterPro:Ribosomal_L2 | SMART:SM01383 | SUPFAM:SSF50249 |
| EnsemblPlantsGene:TraesCS4A01G154700 | EnsemblPlants:TraesCS4A01G154700.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:310738824..310739225
Molecular Weight (calculated)
14942.2 Da
IEP (calculated)
11.399
GRAVY (calculated)
-0.639
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKHLYKTPI PSTRKGTVDR QVKSNPRNNL IHGRHHCGNG RNSRGIITAR HRGGGHKRLY HKIDFRRNQK DISGRIVTIE YGPNRNAYIC LIHYGDGEKR
101: YILHPRGAII GDTIVFGTKV PISMGNALPL SAV
101: YILHPRGAII GDTIVFGTKV PISMGNALPL SAV
001: MRPGRARALR QFTLSTGKSA GRNSSGRITV FHRGGGSKRL LRRIDLKRST SSMGIVESIE YDPNRSSQIA PVRWIKGGCQ KKMNTIEKFA PPRKILEPTT
101: NTISGLFSFS FLPGKVDKRK VACFSPGLMA AYVVVGLPTG MPPLSSSKSA FASKGAGSTK TLVKDVFFSA FSSPKAKRET ASLAFASSFG FPRIAVAGAK
201: PAFFAPRMRQ KVRGKSTFSL CEVQKGRTHS ILWAHRIKGK AGLSWQSFRR QDTLGLVGAA GHKKSKPKTD QGNLPAKPIG ERAKQLKALR GLRAKDGACK
301: VDRAPVTYII ASHQLEAGKM VMNCDWSKPS TSSFLQSAQN DHPKPLFTV
101: NTISGLFSFS FLPGKVDKRK VACFSPGLMA AYVVVGLPTG MPPLSSSKSA FASKGAGSTK TLVKDVFFSA FSSPKAKRET ASLAFASSFG FPRIAVAGAK
201: PAFFAPRMRQ KVRGKSTFSL CEVQKGRTHS ILWAHRIKGK AGLSWQSFRR QDTLGLVGAA GHKKSKPKTD QGNLPAKPIG ERAKQLKALR GLRAKDGACK
301: VDRAPVTYII ASHQLEAGKM VMNCDWSKPS TSSFLQSAQN DHPKPLFTV
Arabidopsis Description
RPL2Rpl2 [Source:UniProtKB/TrEMBL;Acc:G1C2X5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.