Factsheet for TraesCS1B01G395800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38753	Soybean	mitochondrion	70.42	51.28
KRH09254	Soybean	nucleus	69.72	50.77
VIT_05s0094g01100.t01	Wine grape	mitochondrion	68.31	47.55
Solyc08g075410.2.1	Tomato	mitochondrion	66.2	46.53
TraesCS7A01G503700.1	Wheat	mitochondrion	99.3	44.2
TraesCS1D01G010400.1	Wheat	mitochondrion	99.3	44.2
TraesCS1B01G414400.1	Wheat	mitochondrion	97.89	43.3
TraesCS1B01G038000.1	Wheat	mitochondrion	97.18	42.99
TraesCS2B01G330900.1	Wheat	cytosol	45.07	41.29
CDX83442	Canola	mitochondrion, plastid	61.97	40.74
AT2G44065.3	Thale cress	mitochondrion	61.27	40.65
CDX95586	Canola	mitochondrion, plastid	61.97	40.55
CDY17889	Canola	mitochondrion, plastid	61.27	40.47
CDX79785	Canola	mitochondrion, plastid	60.56	40.19
Bra004801.1-P	Field mustard	mitochondrion	59.86	39.72
HORVU3Hr1G001530.1	Barley	plastid	99.3	39.28
HORVU1Hr1G002310.1	Barley	mitochondrion, plastid	99.3	39.17
TraesCS3B01G469800.1	Wheat	cytosol, mitochondrion	42.96	36.97
CDY30453	Canola	mitochondrion	35.21	30.49
OQU80748	Sorghum	endoplasmic reticulum, extracellular	73.24	28.49
GSMUA_AchrUn_...	Banana	mitochondrion	76.06	24.66
EER90317	Sorghum	mitochondrion	75.35	24.65
Zm00001d050496_P001	Maize	mitochondrion	73.94	23.44
CDY23415	Canola	plastid	42.25	22.56
TraesCS4B01G297800.1	Wheat	mitochondrion	35.92	19.54
TraesCS4B01G128700.1	Wheat	mitochondrion	34.51	18.77
TraesCS5B01G088900.1	Wheat	mitochondrion	34.51	18.77

Protein Annotations

MapMan:17.7.1.1.3	Gene3D:2.30.30.30	Gene3D:4.10.950.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR014722
InterPro:IPR014726	PFAM:PF03947	ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF34	InterPro:Rib_L2_dom2
InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_CS	InterPro:Ribosomal_L2_dom3	SMART:SM01382	SUPFAM:SSF50104
EnsemblPlantsGene:TraesCS1B01G395800	EnsemblPlants:TraesCS1B01G395800.1	InterPro:Translation_prot_SH3-like_sf	:	:	:

Description

No Description!

Coordinates

chr1B:+:627841325..627841753

Molecular Weight (calculated)

15424.8 Da

IEP (calculated)

11.862

GRAVY (calculated)

-0.606

Length

142 amino acids

Sequence
(BLAST)

001: MPLSDIRMGT WVHSIELRHG QGAKLVRAAG AYAKVVKESA TQCLVRLPSG VEKLIDSRCR ATIGIVSNPT HGARKLRKAG HSRWLGRRPV VRGVAMNPVD
101: HPHEGGEGRT KGGRPSVSPW GKPTKAGYRT VPKKPKAQLS RD

Best Arabidopsis Sequence Match ( AT2G44065.3 )
(BLAST)

001: MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE
101: PAKGKCLIKL PSGDTKWINA KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG RTSVSPWGKP CKGGYKSASV
201: KKKKKRLAEA AAKM

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8VZU4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.