Factsheet for Bra004801.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79785	Canola	mitochondrion, plastid	98.6	98.6
AT2G44065.3	Thale cress	mitochondrion	90.19	90.19
KRH38753	Soybean	mitochondrion	55.14	60.51
KRH09254	Soybean	nucleus	54.67	60.0
TraesCS1B01G395800.1	Wheat	cytosol	39.72	59.86
VIT_05s0094g01100.t01	Wine grape	mitochondrion	56.54	59.31
Solyc08g075410.2.1	Tomato	mitochondrion	54.21	57.43
Bra040982.1-P	Field mustard	cytosol, mitochondrion	28.5	36.97
TraesCS7A01G503700.1	Wheat	mitochondrion	43.93	29.47
TraesCS1D01G010400.1	Wheat	mitochondrion	43.93	29.47
TraesCS1B01G414400.1	Wheat	mitochondrion	43.93	29.28
TraesCS1B01G038000.1	Wheat	mitochondrion	43.46	28.97
HORVU1Hr1G002310.1	Barley	mitochondrion, plastid	44.39	26.39
HORVU3Hr1G001530.1	Barley	plastid	43.93	26.18
OQU80748	Sorghum	endoplasmic reticulum, extracellular	42.52	24.93
Bra039912.1-P	Field mustard	cytosol	10.28	24.44
Bra037242.1-P	Field mustard	mitochondrion	17.76	24.2
Zm00001d050496_P001	Maize	mitochondrion	47.2	22.54
GSMUA_AchrUn_...	Banana	mitochondrion	45.33	22.15
EER90317	Sorghum	mitochondrion	44.86	22.12
Bra012864.1-P	Field mustard	mitochondrion	25.7	21.24
Bra024481.1-P	Field mustard	mitochondrion	25.23	21.09
Bra039911.1-P	Field mustard	cytosol, mitochondrion	25.23	20.93
Bra017749.1-P	Field mustard	mitochondrion	24.77	19.85
Bra010550.1-P	Field mustard	mitochondrion	23.83	19.77
Bra011664.1-P	Field mustard	cytosol, mitochondrion	23.36	19.38
Bra036831.1-P	Field mustard	cytosol	14.49	14.49

Protein Annotations

MapMan:17.7.1.1.3	Gene3D:2.30.30.30	Gene3D:4.10.950.10	EnsemblPlantsGene:Bra004801	EnsemblPlants:Bra004801.1	EnsemblPlants:Bra004801.1-P
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR014722	InterPro:IPR014726	UniProt:M4CKR6	PFAM:PF03947
ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF34	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_C
InterPro:Ribosomal_L2_CS	InterPro:Ribosomal_L2_dom3	SMART:SM01382	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0002547C4D
SEG:seg	:	:	:	:	:

Description

AT2G44065 (E=2e-077) | ribosomal protein L2 family protein

Coordinates

chrA05:+:1877612..1879360

Molecular Weight (calculated)

22979.2 Da

IEP (calculated)

11.503

GRAVY (calculated)

-0.433

Length

214 amino acids

Sequence
(BLAST)

001: MSALVALCRA RASASSSLFN SLVRPAFRSF STGFGDVQNK TLVAEMEEKM LHMDINSMIG SSMPLGMMRI GTIIHNIEMN PGQGAKLVRA AGTNAQILKE
101: PASGKCLIKL PSGDTRWINA RCRATIGTVS NPSHGVKKLY KAGQNRWRGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG RTSVSPWGKP CKGGYKSASV
201: KKKKKRLAAR EAKM

Best Arabidopsis Sequence Match ( AT2G44065.3 )
(BLAST)

001: MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE
101: PAKGKCLIKL PSGDTKWINA KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG RTSVSPWGKP CKGGYKSASV
201: KKKKKRLAEA AAKM

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8VZU4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.