CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80748	Sorghum	endoplasmic reticulum, extracellular	64.98	77.26
TraesCS1B01G395800.1	Wheat	cytosol	24.65	75.35
TraesCS7A01G503700.1	Wheat	mitochondrion	43.09	58.62
TraesCS1D01G010400.1	Wheat	mitochondrion	43.09	58.62
TraesCS1B01G414400.1	Wheat	mitochondrion	42.63	57.63
TraesCS1B01G038000.1	Wheat	mitochondrion	42.63	57.63
KRH38753	Soybean	mitochondrion	24.88	55.38
KRH09254	Soybean	nucleus	24.88	55.38
GSMUA_AchrUn_...	Banana	mitochondrion	55.3	54.79
VIT_05s0094g01100.t01	Wine grape	mitochondrion	25.35	53.92
HORVU3Hr1G001530.1	Barley	plastid	43.55	52.65
HORVU1Hr1G002310.1	Barley	mitochondrion, plastid	42.86	51.67
Solyc08g075410.2.1	Tomato	mitochondrion	23.96	51.49
AT2G44065.3	Thale cress	mitochondrion	24.19	49.07
CDX83442	Canola	mitochondrion, plastid	23.04	46.3
CDX95586	Canola	mitochondrion, plastid	23.04	46.08
CDX79785	Canola	mitochondrion, plastid	22.58	45.79
CDY17889	Canola	mitochondrion, plastid	22.58	45.58
Bra004801.1-P	Field mustard	mitochondrion	22.12	44.86
CDY30453	Canola	mitochondrion	14.06	37.2
EES18535	Sorghum	mitochondrion	18.43	30.77
OQU78327	Sorghum	mitochondrion	18.43	30.77
EER96269	Sorghum	mitochondrion	17.74	29.5
KXG23748	Sorghum	mitochondrion	17.74	29.5
CDY23415	Canola	plastid	15.21	24.81

Protein Annotations

MapMan:17.7.1.1.2	MapMan:17.7.1.1.3	Gene3D:2.30.30.30	Gene3D:2.40.50.140	Gene3D:4.10.950.10	EntrezGene:8063825
UniProt:C5Z8W0	EnsemblPlants:EER90317	ProteinID:EER90317	ProteinID:EER90317.1	GO:GO:0002181	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0003824	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005762
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015934	GO:GO:0016740	GO:GO:0019538
GO:GO:0022625	GO:GO:0030529	GO:GO:0032543	InterPro:IPR014722	InterPro:IPR014726	InterPro:NA-bd_OB-fold
PFAM:PF00181	PFAM:PF03947	ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF34	InterPro:Rbsml_prot_L2_RNA-bd_dom
InterPro:Rib_L2_dom2	InterPro:Ribosomal_L2	InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_CS	InterPro:Ribosomal_L2_dom3	SMART:SM01382
SMART:SM01383	EnsemblPlantsGene:SORBI_3010G250000	SUPFAM:SSF50104	SUPFAM:SSF50249	unigene:Sbi.15653	InterPro:Translation_prot_SH3-like_sf
UniParc:UPI0001A89773	RefSeq:XP_002438950.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:58928662..58931250

Molecular Weight (calculated)

46519.7 Da

IEP (calculated)

11.243

GRAVY (calculated)

-0.510

Length

434 amino acids

Sequence
(BLAST)

001: MARQSALSLA RDQAKVGALK RLTLGSSKTA GRNSSGRITS YHRGGGAKRL QRKVDVKRDT SSLGIVERIE YDPNRSSSVA LVRWVQGVHF RRPKTLQEPS
101: AKPPVLESAT ADVSARFSLA PLSGRVHKEK EAAALYSSLG SGDIASLKSG ASLPRIALAG AKPTFYAQVR GIEEKQTFSL SGIQKWAADD ALWTQRMKRQ
201: AALSWQNDLK KKPLLQTQAN RFSSSAAKSI GMSKGSKGKA DCVPVSYILA SHQCMPGSTV MNYDSSKPSK STSSSPYSSA NQFDIIDLNS KVGNCIPLAN
301: ARIGTWVHDI ECRPGQGGKM VRAAGTYAKV VQEPGVQCVL RLPSGAEKIV DSKCRATIGI VSNPSHGTRK LRKAGHSRWL GRRPVVRGVA MNPVDHPHGG
401: GEGRTKGGRP SVSPWGKPTK AGYRSPNVAS RKTS

Best Arabidopsis Sequence Match ( AT2G44065.3 )
(BLAST)

001: MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE
101: PAKGKCLIKL PSGDTKWINA KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG RTSVSPWGKP CKGGYKSASV
201: KKKKKRLAEA AAKM

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8VZU4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.