CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G395800.1	Wheat	cytosol	28.49	73.24
EER90317	Sorghum	mitochondrion	77.26	64.98
Zm00001d050496_P001	Maize	mitochondrion	74.52	60.71
KRH38753	Soybean	mitochondrion	27.67	51.79
KRH09254	Soybean	nucleus	27.67	51.79
VIT_05s0094g01100.t01	Wine grape	mitochondrion	27.4	49.02
Solyc08g075410.2.1	Tomato	mitochondrion	27.12	49.01
AT2G44065.3	Thale cress	mitochondrion	26.3	44.86
CDX83442	Canola	mitochondrion, plastid	25.75	43.52
CDX95586	Canola	mitochondrion, plastid	25.75	43.32
CDY17889	Canola	mitochondrion, plastid	25.48	43.26
TraesCS1B01G414400.1	Wheat	mitochondrion	37.81	42.99
CDX79785	Canola	mitochondrion, plastid	25.21	42.99
TraesCS7A01G503700.1	Wheat	mitochondrion	37.53	42.95
TraesCS1D01G010400.1	Wheat	mitochondrion	37.53	42.95
GSMUA_AchrUn_...	Banana	mitochondrion	51.23	42.69
Bra004801.1-P	Field mustard	mitochondrion	24.93	42.52
TraesCS1B01G038000.1	Wheat	mitochondrion	37.26	42.37
HORVU3Hr1G001530.1	Barley	plastid	38.08	38.72
HORVU1Hr1G002310.1	Barley	mitochondrion, plastid	38.08	38.61
CDY30453	Canola	mitochondrion	15.07	33.54
CDY23415	Canola	plastid	17.81	24.44
OQU78327	Sorghum	mitochondrion	16.44	23.08
EES18535	Sorghum	mitochondrion	16.44	23.08
KXG23748	Sorghum	mitochondrion	16.16	22.61
EER96269	Sorghum	mitochondrion	16.16	22.61

Protein Annotations

MapMan:17.7.1.1.3	Gene3D:2.30.30.30	Gene3D:4.10.950.10	UniProt:A0A1Z5RAG8	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR014722	InterPro:IPR014726	ProteinID:OQU80747.1	EnsemblPlants:OQU80748	ProteinID:OQU80748	ProteinID:OQU80748.1
PFAM:PF03947	ScanProsite:PS00467	PANTHER:PTHR13691	PANTHER:PTHR13691:SF34	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L2
InterPro:Ribosomal_L2_C	InterPro:Ribosomal_L2_CS	InterPro:Ribosomal_L2_dom3	SMART:SM01382	EnsemblPlantsGene:SORBI_3007G178401	SUPFAM:SSF50104
InterPro:Translation_prot_SH3-like_sf	UniParc:UPI000B8BA64A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:61159420..61162415

Molecular Weight (calculated)

39514.1 Da

IEP (calculated)

10.977

GRAVY (calculated)

-0.298

Length

365 amino acids

Sequence
(BLAST)

001: MTRIAPLALL WCDGFKGCIF AAPRLCKSSV PSLRYWNLSL LMSPAGFPVR HCLVECIRKR KLLHCTLLWA MHGDIASVKS GGSLPRIALA GAKPTFFAQV
101: RGNEEGKQTF SLSGIKKWAT DNVLWTQRMK RQAALSWQND LKKKHLVQTQ ANRFSSLAAK SIGMSKGAKG KGDLVPVSYV LASHQCMPCS TVMNYDSSKP
201: SKSPASSPYS SSNQFDIIDL NSKVGNCIPL ANARIGTWVH NIECRPGQGG KIVRAAGTYA KVVQEPDAQC VLRLPSGAEK IVDSKCHATI GIVSNPSHGT
301: RKLRKAGHSR WLGRRPIVRG VAMNPVDHPH GGGEGRTKGG RPSVSPWGKP TKAGYRSPSV ASRKA

Best Arabidopsis Sequence Match ( AT2G44065.3 )
(BLAST)

001: MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE
101: PAKGKCLIKL PSGDTKWINA KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG RTSVSPWGKP CKGGYKSASV
201: KKKKKRLAEA AAKM

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8VZU4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.